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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
ANDLCQECEDIVHLLTKMTKEDAFQEAIRKFWEQECDILPWKLLWPRCRQVLDVYLPLWI
DYFQSQINPKAWCNHWGLCPRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7mbk-a1-m1-cB 82 82 1.0000 1.0000 1.0000 1.13e-57 7mbk-a1-m1-cA_7mbk-a1-m1-cB
2 7mbk-a1-m1-cA 77 77 0.9390 1.0000 1.0000 3.40e-53 7mbk-a1-m1-cA_7mbk-a1-m1-cB
3 6vyn-a3-m1-cF 79 79 0.8902 0.9241 0.9241 1.90e-50 6vyn-a3-m1-cD_6vyn-a3-m1-cF
4 6vyn-a3-m1-cD 78 78 0.8780 0.9231 0.9231 1.68e-49 6vyn-a3-m1-cD_6vyn-a3-m1-cF
5 7p4t-a1-m1-cD 80 76 0.2805 0.2875 0.3026 1.30e-08 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
6 7p4t-a1-m1-cC 80 76 0.2805 0.2875 0.3026 1.30e-08 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
7 7p4t-a1-m1-cB 80 76 0.2805 0.2875 0.3026 1.30e-08 7p4t-a1-m1-cB_7p4t-a1-m1-cC
8 7p4t-a1-m1-cA 80 76 0.2805 0.2875 0.3026 1.30e-08 7p4t-a1-m1-cA_7p4t-a1-m1-cD
9 5nxb-a1-m1-cD 80 76 0.2805 0.2875 0.3026 1.30e-08 5nxb-a1-m1-cC_5nxb-a1-m1-cD
10 5nxb-a1-m1-cC 80 76 0.2805 0.2875 0.3026 1.30e-08 5nxb-a1-m1-cC_5nxb-a1-m1-cD
11 2dob-a2-m2-cA 79 75 0.2927 0.3038 0.3200 3.56e-08 2dob-a2-m1-cA_2dob-a2-m2-cA
12 2dob-a2-m1-cA 79 75 0.2927 0.3038 0.3200 3.56e-08 2dob-a2-m1-cA_2dob-a2-m2-cA
13 2qyp-a1-m1-cA 78 75 0.2439 0.2564 0.2667 3.45e-05 2qyp-a1-m1-cA_2qyp-a1-m1-cB
14 2qyp-a1-m1-cB 81 75 0.2439 0.2469 0.2667 3.61e-05 2qyp-a1-m1-cA_2qyp-a1-m1-cB
15 2rb3-a2-m1-cC 79 78 0.2317 0.2405 0.2436 0.001 2rb3-a2-m1-cB_2rb3-a2-m1-cC
16 2rb3-a2-m1-cB 79 78 0.2317 0.2405 0.2436 0.001 2rb3-a2-m1-cB_2rb3-a2-m1-cC
17 5u85-a1-m1-cA 78 78 0.2317 0.2436 0.2436 0.002 5u85-a1-m1-cB_5u85-a1-m1-cA
18 5u85-a1-m1-cB 77 77 0.2317 0.2468 0.2468 0.002 5u85-a1-m1-cB_5u85-a1-m1-cA
19 5zkq-a1-m1-cB 399 24 0.1585 0.0326 0.5417 0.49 5zkq-a1-m1-cA_5zkq-a1-m1-cB
20 5zkq-a1-m1-cA 279 24 0.1585 0.0466 0.5417 0.53 5zkq-a1-m1-cA_5zkq-a1-m1-cB
21 3kkc-a2-m1-cD 173 88 0.3049 0.1445 0.2841 3.2 3kkc-a2-m1-cC_3kkc-a2-m1-cD
22 3kkc-a2-m1-cC 173 88 0.3049 0.1445 0.2841 3.2 3kkc-a2-m1-cC_3kkc-a2-m1-cD
23 6hjw-a1-m1-cB 245 69 0.2439 0.0816 0.2899 3.3 6hjw-a1-m1-cA_6hjw-a1-m1-cB
24 3awd-a1-m1-cD 257 39 0.1707 0.0545 0.3590 5.8 3awd-a1-m1-cA_3awd-a1-m1-cD, 3awd-a1-m1-cB_3awd-a1-m1-cD, 3awd-a1-m1-cC_3awd-a1-m1-cD
25 3awd-a1-m1-cC 257 39 0.1707 0.0545 0.3590 5.8 3awd-a1-m1-cC_3awd-a1-m1-cD
26 3awd-a1-m1-cB 257 39 0.1707 0.0545 0.3590 5.8 3awd-a1-m1-cB_3awd-a1-m1-cD
27 3awd-a1-m1-cA 257 39 0.1707 0.0545 0.3590 5.8 3awd-a1-m1-cA_3awd-a1-m1-cD
28 5ioj-a1-m1-cA 494 37 0.1463 0.0243 0.3243 6.2 5ioj-a1-m1-cA_5ioj-a1-m1-cB
29 5ioj-a1-m1-cB 495 37 0.1463 0.0242 0.3243 6.2 5ioj-a1-m1-cA_5ioj-a1-m1-cB
30 2wrc-a1-m1-cA 474 48 0.2073 0.0359 0.3542 6.9 2wrc-a1-m1-cC_2wrc-a1-m1-cA
31 2wrc-a1-m1-cC 467 48 0.2073 0.0364 0.3542 8.6 2wrc-a1-m1-cC_2wrc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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