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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
ANEGDVYKCELCGQVVKVLEEGGGTLVCCGEDMVKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1dxg-a1-m1-cB 36 36 1.0000 1.0000 1.0000 3.03e-19 1dxg-a1-m1-cA_1dxg-a1-m1-cB
2 1dxg-a1-m1-cA 36 36 1.0000 1.0000 1.0000 3.03e-19 1dxg-a1-m1-cA_1dxg-a1-m1-cB
3 1dfx-a1-m2-cA 125 29 0.5000 0.1440 0.6207 2.09e-06 1dfx-a1-m1-cA_1dfx-a1-m2-cA
4 1dfx-a1-m1-cA 125 29 0.5000 0.1440 0.6207 2.09e-06 1dfx-a1-m1-cA_1dfx-a1-m2-cA
5 2ji2-a1-m1-cB 125 28 0.5000 0.1440 0.6429 2.50e-06 2ji2-a1-m1-cB_2ji2-a1-m1-cA
6 2ji2-a1-m1-cA 126 28 0.5000 0.1429 0.6429 2.59e-06 2ji2-a1-m1-cB_2ji2-a1-m1-cA
7 1q14-a1-m3-cA 289 29 0.3056 0.0381 0.3793 4.8 1q14-a1-m2-cA_1q14-a1-m3-cA
8 1q14-a1-m2-cA 289 29 0.3056 0.0381 0.3793 4.8 1q14-a1-m2-cA_1q14-a1-m3-cA
9 1szd-a2-m2-cA 291 29 0.3056 0.0378 0.3793 4.8 1szd-a2-m1-cA_1szd-a2-m2-cA
10 1szd-a2-m1-cA 291 29 0.3056 0.0378 0.3793 4.8 1szd-a2-m1-cA_1szd-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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