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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
ANLHLLRQKIEEQAAKYKHSVPKKCCYDGARVNFYETCEERVARVTIGPLCIRAFNECCT
IANKIRKES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4p3a-a6-m1-cD 69 69 1.0000 1.0000 1.0000 9.70e-47 4p3a-a6-m1-cC_4p3a-a6-m1-cD
2 4p3a-a6-m1-cC 68 68 0.9855 1.0000 1.0000 5.65e-46 4p3a-a6-m1-cC_4p3a-a6-m1-cD
3 4p39-a7-m1-cB 69 61 0.6087 0.6087 0.6885 3.70e-27 4p39-a7-m1-cB_4p39-a7-m3-cC
4 4p39-a5-m1-cB 69 61 0.6087 0.6087 0.6885 3.70e-27 4p39-a5-m1-cA_4p39-a5-m1-cB
5 4p39-a5-m1-cA 69 61 0.6087 0.6087 0.6885 3.70e-27 4p39-a5-m1-cA_4p39-a5-m1-cB
6 4p39-a7-m3-cC 69 61 0.6087 0.6087 0.6885 4.87e-27 4p39-a7-m1-cB_4p39-a7-m3-cC
7 3cu7-a3-m1-cB 1481 62 0.6087 0.0284 0.6774 1.89e-26 3cu7-a3-m1-cB_3cu7-a3-m1-cA
8 3cu7-a3-m1-cA 1625 62 0.6087 0.0258 0.6774 2.08e-26 3cu7-a3-m1-cB_3cu7-a3-m1-cA
9 3hqa-a3-m1-cA 66 62 0.5942 0.6212 0.6613 4.09e-26 3hqa-a3-m1-cB_3hqa-a3-m1-cA
10 3hqa-a3-m1-cB 64 60 0.5797 0.6250 0.6667 7.68e-25 3hqa-a3-m1-cB_3hqa-a3-m1-cA
11 4hw5-a3-m1-cB 77 64 0.2754 0.2468 0.2969 1.20e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
12 4hw5-a3-m1-cA 77 64 0.2754 0.2468 0.2969 1.20e-04 4hw5-a3-m1-cA_4hw5-a3-m1-cB
13 2z2p-a1-m1-cB 293 38 0.1594 0.0375 0.2895 3.0 2z2p-a1-m1-cA_2z2p-a1-m1-cB
14 2z2p-a1-m1-cA 293 38 0.1594 0.0375 0.2895 3.0 2z2p-a1-m1-cA_2z2p-a1-m1-cB
15 2pgw-a1-m1-cH 363 17 0.1159 0.0220 0.4706 8.0 2pgw-a1-m1-cD_2pgw-a1-m1-cH, 2pgw-a1-m1-cF_2pgw-a1-m1-cH, 2pgw-a1-m1-cH_2pgw-a1-m1-cC
16 2pgw-a1-m1-cF 363 17 0.1159 0.0220 0.4706 8.0 2pgw-a1-m1-cF_2pgw-a1-m1-cH
17 2pgw-a1-m1-cD 363 17 0.1159 0.0220 0.4706 8.0 2pgw-a1-m1-cD_2pgw-a1-m1-cH
18 2pgw-a1-m1-cC 366 17 0.1159 0.0219 0.4706 8.0 2pgw-a1-m1-cH_2pgw-a1-m1-cC
19 7ty0-a1-m1-cB 68 36 0.1594 0.1618 0.3056 8.8 7ty0-a1-m1-cB_7ty0-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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