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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
ANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQ
GIRWHGLDEAKKIELKKFHQSLEGHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mab-a1-m1-cB 88 88 1.0000 1.0000 1.0000 9.86e-61 3mab-a1-m1-cA_3mab-a1-m1-cB
2 3mab-a1-m1-cA 85 84 0.9545 0.9882 1.0000 3.29e-57 3mab-a1-m1-cA_3mab-a1-m1-cB
3 3bqt-a1-m1-cA 81 82 0.9205 1.0000 0.9878 9.48e-53 3bqt-a1-m1-cB_3bqt-a1-m1-cA
4 3bqt-a1-m1-cB 80 81 0.9091 1.0000 0.9877 7.83e-52 3bqt-a1-m1-cB_3bqt-a1-m1-cA
5 3k5n-a1-m1-cA 759 51 0.2159 0.0250 0.3725 0.14 3k5n-a1-m1-cB_3k5n-a1-m1-cA
6 3k5n-a1-m1-cB 738 51 0.2159 0.0257 0.3725 0.16 3k5n-a1-m1-cB_3k5n-a1-m1-cA
7 4jds-a1-m2-cA 245 43 0.1705 0.0612 0.3488 0.83 4jds-a1-m1-cA_4jds-a1-m2-cA
8 4jds-a1-m1-cA 245 43 0.1705 0.0612 0.3488 0.83 4jds-a1-m1-cA_4jds-a1-m2-cA
9 2ovp-a2-m4-cB 441 35 0.1250 0.0249 0.3143 1.0 2ovp-a2-m2-cB_2ovp-a2-m4-cB
10 2ovp-a2-m2-cB 441 35 0.1250 0.0249 0.3143 1.0 2ovp-a2-m2-cB_2ovp-a2-m4-cB
11 2ovq-a2-m4-cB 444 35 0.1250 0.0248 0.3143 1.0 2ovq-a2-m1-cB_2ovq-a2-m4-cB
12 2ovq-a2-m1-cB 444 35 0.1250 0.0248 0.3143 1.0 2ovq-a2-m1-cB_2ovq-a2-m4-cB
13 4w66-a1-m1-cB 217 30 0.1136 0.0461 0.3333 1.2 4w66-a1-m1-cB_4w66-a1-m1-cA
14 4w66-a1-m1-cA 232 30 0.1136 0.0431 0.3333 1.6 4w66-a1-m1-cB_4w66-a1-m1-cA
15 7yvz-a1-m2-cA 63 19 0.0909 0.1270 0.4211 1.8 7yvz-a1-m1-cA_7yvz-a1-m2-cA
16 7yvz-a1-m1-cA 63 19 0.0909 0.1270 0.4211 1.8 7yvz-a1-m1-cA_7yvz-a1-m2-cA
17 5y6i-a1-m1-cB 234 35 0.1136 0.0427 0.2857 5.1 5y6i-a1-m1-cB_5y6i-a1-m1-cA
18 5y6i-a1-m1-cA 243 34 0.1136 0.0412 0.2941 5.2 5y6i-a1-m1-cB_5y6i-a1-m1-cA
19 8dyu-a1-m1-cC 306 34 0.0909 0.0261 0.2353 6.7 8dyu-a1-m1-cB_8dyu-a1-m1-cC
20 8dyu-a1-m1-cB 306 34 0.0909 0.0261 0.2353 6.7 8dyu-a1-m1-cB_8dyu-a1-m1-cC
21 5l1m-a1-m2-cA 140 48 0.1591 0.1000 0.2917 7.7 5l1m-a1-m1-cA_5l1m-a1-m2-cA
22 5l1m-a1-m1-cA 140 48 0.1591 0.1000 0.2917 7.7 5l1m-a1-m1-cA_5l1m-a1-m2-cA
23 3jvn-a1-m2-cA 115 41 0.1591 0.1217 0.3415 8.3 3jvn-a1-m1-cA_3jvn-a1-m2-cA
24 3jvn-a1-m1-cA 115 41 0.1591 0.1217 0.3415 8.3 3jvn-a1-m1-cA_3jvn-a1-m2-cA
25 1a0e-a1-m2-cD 443 24 0.1136 0.0226 0.4167 8.8 1a0e-a1-m1-cA_1a0e-a1-m2-cD, 1a0e-a1-m1-cD_1a0e-a1-m2-cD, 1a0e-a1-m2-cA_1a0e-a1-m2-cD
26 1a0e-a1-m2-cA 443 24 0.1136 0.0226 0.4167 8.8 1a0e-a1-m2-cA_1a0e-a1-m2-cD
27 1a0e-a1-m1-cD 443 24 0.1136 0.0226 0.4167 8.8 1a0e-a1-m1-cD_1a0e-a1-m2-cD
28 1a0e-a1-m1-cA 443 24 0.1136 0.0226 0.4167 8.8 1a0e-a1-m1-cA_1a0e-a1-m2-cD

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Reference:
Jacob Schwartz et al.

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