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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
ANVEKMSVAVTPQQAAVMREAVEAGEYATASEIVREAVRDWLAKRELRHDDIRRLRQLWD
EGKASGRPEPVDFDALRKEARQKLT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ceg-a1-m2-cC 85 85 1.0000 1.0000 1.0000 4.92e-57 5ceg-a1-m1-cC_5ceg-a1-m2-cC
2 5ceg-a1-m1-cC 85 85 1.0000 1.0000 1.0000 4.92e-57 5ceg-a1-m1-cC_5ceg-a1-m2-cC
3 2es0-a1-m2-cA 129 49 0.1882 0.1240 0.3265 0.048 2es0-a1-m1-cA_2es0-a1-m2-cA
4 2es0-a1-m1-cA 129 49 0.1882 0.1240 0.3265 0.048 2es0-a1-m1-cA_2es0-a1-m2-cA
5 2a72-a1-m1-cB 133 49 0.1882 0.1203 0.3265 0.057 2a72-a1-m1-cA_2a72-a1-m1-cB
6 2a72-a1-m1-cA 133 49 0.1882 0.1203 0.3265 0.057 2a72-a1-m1-cA_2a72-a1-m1-cB
7 3kxe-a1-m1-cD 74 75 0.2941 0.3378 0.3333 0.066 3kxe-a1-m1-cD_3kxe-a1-m1-cC
8 3kxe-a1-m1-cC 75 75 0.2941 0.3333 0.3333 0.077 3kxe-a1-m1-cD_3kxe-a1-m1-cC
9 4me7-a1-m1-cF 74 25 0.1176 0.1351 0.4000 6.5 4me7-a1-m1-cE_4me7-a1-m1-cF
10 6tp5-a1-m1-cA 370 30 0.1412 0.0324 0.4000 6.7 6tp5-a1-m1-cB_6tp5-a1-m1-cA
11 4me7-a1-m1-cE 73 25 0.1176 0.1370 0.4000 7.3 4me7-a1-m1-cE_4me7-a1-m1-cF
12 6dk3-a2-m2-cA 423 25 0.1294 0.0260 0.4400 7.4 6dk3-a2-m1-cA_6dk3-a2-m2-cA
13 6dk3-a2-m1-cA 423 25 0.1294 0.0260 0.4400 7.4 6dk3-a2-m1-cA_6dk3-a2-m2-cA
14 5c4q-a3-m1-cA 118 31 0.1176 0.0847 0.3226 7.5 5c4q-a3-m1-cB_5c4q-a3-m1-cA
15 6tp5-a1-m1-cB 356 30 0.1412 0.0337 0.4000 7.7 6tp5-a1-m1-cB_6tp5-a1-m1-cA
16 5c4q-a3-m1-cB 114 31 0.1176 0.0877 0.3226 8.6 5c4q-a3-m1-cB_5c4q-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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