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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
APQNITELCSEYHNTQIYELNKEIKTYTESLAGYREMVIISFANGATFQVEVPKRPLERM
KDTLRAAYFTGIKVSKLCVWNNKTPNSIAAIELS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wv6-a1-m1-cK 94 94 1.0000 1.0000 1.0000 2.94e-67 2wv6-a1-m1-cL_2wv6-a1-m1-cK
2 2wv6-a1-m1-cL 91 94 0.9574 0.9890 0.9574 8.98e-60 2wv6-a1-m1-cL_2wv6-a1-m1-cK
3 4l63-a1-m1-cE 104 101 0.8617 0.7788 0.8020 3.09e-55 4l63-a1-m1-cF_4l63-a1-m1-cE
4 4l63-a1-m1-cF 103 101 0.8617 0.7864 0.8020 3.13e-55 4l63-a1-m1-cF_4l63-a1-m1-cE
5 3efx-a1-m1-cG 95 95 0.7766 0.7684 0.7684 9.13e-50 3efx-a1-m1-cG_3efx-a1-m1-cH
6 3efx-a1-m1-cH 100 100 0.7766 0.7300 0.7300 5.57e-49 3efx-a1-m1-cG_3efx-a1-m1-cH
7 6hsv-a2-m1-cC 97 95 0.7234 0.7010 0.7158 2.32e-46 6hsv-a2-m1-cC_6hsv-a2-m1-cD
8 6hsv-a2-m1-cD 103 101 0.7234 0.6602 0.6733 1.90e-45 6hsv-a2-m1-cC_6hsv-a2-m1-cD
9 7kln-a1-m1-cL1 361 63 0.2128 0.0554 0.3175 0.92 7kln-a1-m1-cH1_7kln-a1-m1-cL1, 7kln-a1-m1-cJ1_7kln-a1-m1-cL1, 7kln-a1-m1-cK1_7kln-a1-m1-cL1
10 7kln-a1-m1-cK1 361 63 0.2128 0.0554 0.3175 0.92 7kln-a1-m1-cK1_7kln-a1-m1-cL1
11 7kln-a1-m1-cJ1 361 63 0.2128 0.0554 0.3175 0.92 7kln-a1-m1-cJ1_7kln-a1-m1-cL1
12 7kln-a1-m1-cH1 361 63 0.2128 0.0554 0.3175 0.92 7kln-a1-m1-cH1_7kln-a1-m1-cL1
13 3ilx-a1-m1-cA 137 61 0.2021 0.1387 0.3115 2.7 3ilx-a1-m1-cB_3ilx-a1-m1-cA
14 3ilx-a1-m1-cB 136 61 0.2021 0.1397 0.3115 2.9 3ilx-a1-m1-cB_3ilx-a1-m1-cA
15 3v3v-a3-m8-cA 351 64 0.1702 0.0456 0.2500 3.6 3v3v-a3-m3-cA_3v3v-a3-m8-cA, 3v3v-a3-m4-cA_3v3v-a3-m8-cA
16 3v3v-a3-m4-cA 351 64 0.1702 0.0456 0.2500 3.6 3v3v-a3-m4-cA_3v3v-a3-m8-cA
17 3v3v-a3-m3-cA 351 64 0.1702 0.0456 0.2500 3.6 3v3v-a3-m3-cA_3v3v-a3-m8-cA
18 3e7o-a1-m2-cB 326 53 0.1383 0.0399 0.2453 5.4 3e7o-a1-m2-cB_3e7o-a1-m1-cA
19 4pxo-a1-m1-cA 216 27 0.1383 0.0602 0.4815 6.5 4pxo-a1-m1-cB_4pxo-a1-m1-cA
20 4pxo-a1-m1-cB 214 27 0.1383 0.0607 0.4815 6.6 4pxo-a1-m1-cB_4pxo-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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