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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
AQDWHRADIVAALHKRGITLAGLSRAHGLAARTLSNAMERHYPRAERLIAQALDMRPEDI
WPQRYRNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f9i-a1-m1-cB 69 68 1.0000 0.9855 1.0000 2.89e-45 7f9i-a1-m1-cA_7f9i-a1-m1-cB
2 7f9i-a1-m1-cA 68 68 1.0000 1.0000 1.0000 4.04e-45 7f9i-a1-m1-cA_7f9i-a1-m1-cB
3 6z2x-a1-m1-cF 2325 46 0.2500 0.0073 0.3696 1.3 6z2x-a1-m1-cE_6z2x-a1-m1-cF
4 6z2x-a1-m1-cE 2325 46 0.2500 0.0073 0.3696 1.3 6z2x-a1-m1-cE_6z2x-a1-m1-cF
5 7jsr-a1-m2-cA 1471 45 0.2353 0.0109 0.3556 1.6 7jsr-a1-m2-cB_7jsr-a1-m2-cA
6 7jsr-a1-m1-cA 1471 45 0.2353 0.0109 0.3556 1.6 7jsr-a1-m2-cB_7jsr-a1-m1-cA
7 7jsr-a1-m2-cB 1452 45 0.2353 0.0110 0.3556 1.6 7jsr-a1-m2-cB_7jsr-a1-m1-cA, 7jsr-a1-m2-cB_7jsr-a1-m2-cA
8 4aey-a1-m8-cA 107 47 0.2353 0.1495 0.3404 2.1 4aey-a1-m7-cA_4aey-a1-m8-cA
9 4aey-a1-m7-cA 107 47 0.2353 0.1495 0.3404 2.1 4aey-a1-m7-cA_4aey-a1-m8-cA
10 3hm2-a1-m1-cD 165 37 0.1765 0.0727 0.3243 9.7 3hm2-a1-m1-cD_3hm2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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