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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
AQPAVKHALGQFNQVVTMFEKATAAASCNWITCLESLAASSAACAAALGELGLDIPLDLA
CIASASAQGCEGCF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7r6u-a1-m1-cB 74 74 1.0000 1.0000 1.0000 1.30e-47 7r6u-a1-m1-cA_7r6u-a1-m1-cB
2 7r6u-a1-m1-cA 72 72 0.9730 1.0000 1.0000 2.52e-46 7r6u-a1-m1-cA_7r6u-a1-m1-cB
3 2jv7-a1-m1-cB 78 76 0.5135 0.4872 0.5000 5.53e-10 2jv7-a1-m1-cA_2jv7-a1-m1-cB
4 2jv7-a1-m1-cA 78 76 0.5135 0.4872 0.5000 5.53e-10 2jv7-a1-m1-cA_2jv7-a1-m1-cB
5 7r79-a2-m1-cC 77 76 0.5270 0.5065 0.5132 1.21e-09 7r79-a2-m1-cD_7r79-a2-m1-cC
6 7r79-a2-m1-cD 76 75 0.5135 0.5000 0.5067 8.58e-09 7r79-a2-m1-cD_7r79-a2-m1-cC
7 3nkz-a3-m1-cD 92 25 0.1081 0.0870 0.3200 1.0 3nkz-a3-m1-cC_3nkz-a3-m1-cD
8 3nkz-a1-m1-cD 92 25 0.1081 0.0870 0.3200 1.0 3nkz-a1-m1-cD_3nkz-a1-m1-cA
9 3nkz-a1-m1-cA 93 25 0.1081 0.0860 0.3200 1.0 3nkz-a1-m1-cC_3nkz-a1-m1-cA, 3nkz-a1-m1-cD_3nkz-a1-m1-cA
10 3nkz-a3-m1-cC 91 25 0.1081 0.0879 0.3200 1.0 3nkz-a3-m1-cC_3nkz-a3-m1-cD
11 3nkz-a1-m1-cC 91 25 0.1081 0.0879 0.3200 1.0 3nkz-a1-m1-cC_3nkz-a1-m1-cA
12 6v8p-a1-m1-cE 197 39 0.1757 0.0660 0.3333 4.2 6v8p-a1-m1-cD_6v8p-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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