Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
AQQLYCTVVLWDLSRSAATVASLRAYLRDHTVPGLRQKTWISSTGPEGEQWGAVYLWDSP
EAAYGRPPGVSKVVELIGYRPTERRYYSVEAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4za1-a1-m1-cC 92 92 1.0000 1.0000 1.0000 3.32e-63 4za1-a1-m1-cB_4za1-a1-m1-cC, 4za1-a1-m1-cC_4za1-a1-m1-cA
2 4za1-a1-m1-cA 99 97 0.9891 0.9192 0.9381 3.81e-60 4za1-a1-m1-cC_4za1-a1-m1-cA
3 4za1-a1-m1-cB 90 90 0.9674 0.9889 0.9889 3.20e-59 4za1-a1-m1-cB_4za1-a1-m1-cC
4 6mzj-a1-m1-cE 550 35 0.1196 0.0200 0.3143 4.3 6mzj-a1-m1-cB_6mzj-a1-m1-cE
5 6mzj-a1-m1-cB 550 35 0.1196 0.0200 0.3143 4.3 6mzj-a1-m1-cB_6mzj-a1-m1-cE
6 2vf8-a1-m1-cA 806 66 0.1739 0.0199 0.2424 4.6 2vf8-a1-m1-cA_2vf8-a1-m1-cB
7 2vf8-a1-m1-cB 835 66 0.1739 0.0192 0.2424 4.7 2vf8-a1-m1-cA_2vf8-a1-m1-cB
8 4nar-a2-m2-cA 411 42 0.1522 0.0341 0.3333 6.5 4nar-a2-m1-cA_4nar-a2-m2-cA
9 4nar-a2-m1-cA 411 42 0.1522 0.0341 0.3333 6.5 4nar-a2-m1-cA_4nar-a2-m2-cA
10 2dr1-a1-m1-cA 381 23 0.0870 0.0210 0.3478 8.8 2dr1-a1-m1-cB_2dr1-a1-m1-cA
11 2dr1-a1-m1-cB 374 23 0.0870 0.0214 0.3478 8.9 2dr1-a1-m1-cB_2dr1-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600