Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=97)
AQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIE
RRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3gla-a1-m1-cA 97 97 1.0000 1.0000 1.0000 9.80e-68 3gla-a1-m1-cA_3gla-a1-m1-cB
2 3gla-a1-m1-cB 99 96 0.9897 0.9697 1.0000 4.50e-67 3gla-a1-m1-cA_3gla-a1-m1-cB
3 5j7n-a3-m3-cA 109 97 0.8557 0.7615 0.8557 1.08e-57 5j7n-a3-m1-cA_5j7n-a3-m3-cA
4 5j7n-a3-m1-cA 109 97 0.8557 0.7615 0.8557 1.08e-57 5j7n-a3-m1-cA_5j7n-a3-m3-cA
5 5j7n-a2-m2-cA 109 97 0.8557 0.7615 0.8557 1.08e-57 5j7n-a2-m1-cA_5j7n-a2-m2-cA
6 5j7n-a2-m1-cA 109 97 0.8557 0.7615 0.8557 1.08e-57 5j7n-a2-m1-cA_5j7n-a2-m2-cA
7 5ds2-a2-m1-cD 94 92 0.3918 0.4043 0.4130 5.37e-16 5ds2-a2-m1-cC_5ds2-a2-m1-cD
8 5ds2-a2-m1-cC 94 92 0.3918 0.4043 0.4130 5.37e-16 5ds2-a2-m1-cC_5ds2-a2-m1-cD
9 3w1z-a1-m4-cD 110 96 0.3814 0.3364 0.3854 8.08e-16 3w1z-a1-m4-cD_3w1z-a1-m2-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
10 3w1z-a1-m4-cC 130 96 0.3814 0.2846 0.3854 1.74e-15 3w1z-a1-m4-cC_3w1z-a1-m1-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
11 5ds1-a2-m1-cC 90 90 0.3608 0.3889 0.3889 1.85e-15 5ds1-a2-m1-cB_5ds1-a2-m1-cC
12 3w1z-a1-m4-cA 134 96 0.3814 0.2761 0.3854 2.26e-15 3w1z-a1-m2-cA_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cA
13 3w1z-a1-m2-cA 134 96 0.3814 0.2761 0.3854 2.26e-15 3w1z-a1-m2-cA_3w1z-a1-m4-cA
14 3w1z-a1-m1-cA 134 96 0.3814 0.2761 0.3854 2.26e-15 3w1z-a1-m1-cA_3w1z-a1-m4-cB
15 3w1z-a1-m4-cB 143 96 0.3814 0.2587 0.3854 3.56e-15 3w1z-a1-m1-cA_3w1z-a1-m4-cB, 3w1z-a1-m1-cB_3w1z-a1-m4-cB
16 3w1z-a1-m2-cB 143 96 0.3814 0.2587 0.3854 3.56e-15 3w1z-a1-m4-cD_3w1z-a1-m2-cB
17 3w1z-a1-m1-cB 143 96 0.3814 0.2587 0.3854 3.56e-15 3w1z-a1-m1-cB_3w1z-a1-m4-cB, 3w1z-a1-m4-cC_3w1z-a1-m1-cB
18 5ds1-a2-m1-cB 90 88 0.3402 0.3667 0.3750 7.88e-15 5ds1-a2-m1-cB_5ds1-a2-m1-cC
19 4fei-a1-m2-cA 102 94 0.3196 0.3039 0.3298 1.03e-10 4fei-a1-m1-cA_4fei-a1-m2-cA
20 4fei-a1-m1-cA 102 94 0.3196 0.3039 0.3298 1.03e-10 4fei-a1-m1-cA_4fei-a1-m2-cA
21 6l6m-a1-m2-cD 105 94 0.2474 0.2286 0.2553 1.34e-07 6l6m-a1-m1-cC_6l6m-a1-m2-cD, 6l6m-a1-m2-cB_6l6m-a1-m2-cD
22 6l6m-a1-m2-cB 105 94 0.2474 0.2286 0.2553 1.34e-07 6l6m-a1-m2-cB_6l6m-a1-m2-cD
23 6l6m-a1-m1-cC 105 94 0.2474 0.2286 0.2553 1.34e-07 6l6m-a1-m1-cC_6l6m-a1-m2-cD
24 7oa6-a1-m1-cJ 116 96 0.3299 0.2759 0.3333 3.46e-07 7oa6-a1-m1-cJ_7oa6-a1-m1-cB, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
25 7oa6-a1-m1-cI 152 96 0.3299 0.2105 0.3333 5.57e-07 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
26 7oa6-a1-m1-cB 152 96 0.3299 0.2105 0.3333 5.57e-07 7oa6-a1-m1-cA_7oa6-a1-m1-cB, 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cB
27 7oa6-a1-m1-cA 152 96 0.3299 0.2105 0.3333 5.57e-07 7oa6-a1-m1-cA_7oa6-a1-m1-cB
28 4i88-a1-m3-cA 113 92 0.2887 0.2478 0.3043 1.78e-04 4i88-a1-m3-cA_4i88-a1-m3-cE
29 4i88-a1-m3-cE 114 92 0.2887 0.2456 0.3043 1.92e-04 4i88-a1-m3-cA_4i88-a1-m3-cE
30 4i88-a1-m3-cD 114 92 0.2887 0.2456 0.3043 1.92e-04 4i88-a1-m3-cB_4i88-a1-m3-cD
31 4i88-a1-m3-cB 114 92 0.2887 0.2456 0.3043 1.92e-04 4i88-a1-m3-cB_4i88-a1-m3-cD
32 4eld-a1-m9-cB 114 92 0.2887 0.2456 0.3043 1.92e-04 4eld-a1-m9-cB_4eld-a1-m18-cA
33 4eld-a1-m18-cA 117 92 0.2887 0.2393 0.3043 2.04e-04 4eld-a1-m9-cB_4eld-a1-m18-cA
34 3n3e-a1-m1-cB 104 90 0.2371 0.2212 0.2556 0.001 3n3e-a1-m1-cB_3n3e-a1-m1-cA
35 3n3e-a1-m1-cA 106 90 0.2371 0.2170 0.2556 0.001 3n3e-a1-m1-cB_3n3e-a1-m1-cA
36 4rzk-a1-m1-cA 87 93 0.2577 0.2874 0.2688 0.001 4rzk-a1-m1-cA_4rzk-a1-m1-cB
37 4rzk-a1-m1-cB 87 93 0.2577 0.2874 0.2688 0.001 4rzk-a1-m1-cA_4rzk-a1-m1-cB
38 2y1y-a1-m2-cA 77 82 0.2062 0.2597 0.2439 0.004 2y1y-a1-m1-cA_2y1y-a1-m2-cA
39 2y1y-a1-m1-cA 77 82 0.2062 0.2597 0.2439 0.004 2y1y-a1-m1-cA_2y1y-a1-m2-cA
40 3vqk-a1-m4-cD 107 93 0.2887 0.2617 0.3011 0.014 3vqk-a1-m4-cB_3vqk-a1-m4-cD
41 3vqk-a1-m4-cC 107 93 0.2887 0.2617 0.3011 0.014 3vqk-a1-m2-cC_3vqk-a1-m4-cC
42 3vqk-a1-m4-cB 107 93 0.2887 0.2617 0.3011 0.014 3vqk-a1-m4-cB_3vqk-a1-m4-cD
43 3vqk-a1-m2-cC 107 93 0.2887 0.2617 0.3011 0.014 3vqk-a1-m2-cC_3vqk-a1-m4-cC
44 2ks0-a1-m1-cB 66 29 0.1031 0.1515 0.3448 4.3 2ks0-a1-m1-cA_2ks0-a1-m1-cB
45 2ks0-a1-m1-cA 66 29 0.1031 0.1515 0.3448 4.3 2ks0-a1-m1-cA_2ks0-a1-m1-cB
46 3ipf-a1-m1-cB 65 20 0.0928 0.1385 0.4500 5.5 3ipf-a1-m1-cB_3ipf-a1-m1-cA
47 3ipf-a1-m1-cA 69 20 0.0928 0.1304 0.4500 6.2 3ipf-a1-m1-cB_3ipf-a1-m1-cA
48 3kt7-a1-m2-cA 557 39 0.1340 0.0233 0.3333 6.5 3kt7-a1-m1-cA_3kt7-a1-m2-cA
49 3kt7-a1-m1-cA 557 39 0.1340 0.0233 0.3333 6.5 3kt7-a1-m1-cA_3kt7-a1-m2-cA
50 6nko-a6-m1-cB 192 34 0.1134 0.0573 0.3235 7.5 6nko-a6-m1-cC_6nko-a6-m1-cB
51 4rjw-a1-m3-cA 426 45 0.1237 0.0282 0.2667 9.7 4rjw-a1-m2-cA_4rjw-a1-m3-cA
52 4rjw-a1-m2-cA 426 45 0.1237 0.0282 0.2667 9.7 4rjw-a1-m2-cA_4rjw-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600