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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
ARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGI
VVNILFKINGTTEI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ihr-a1-m1-cB 74 74 1.0000 1.0000 1.0000 3.31e-50 1ihr-a1-m1-cA_1ihr-a1-m1-cB
2 1u07-a1-m1-cA 90 74 1.0000 0.8222 1.0000 4.30e-50 1u07-a1-m1-cB_1u07-a1-m1-cA
3 1u07-a1-m1-cB 88 74 1.0000 0.8409 1.0000 4.93e-50 1u07-a1-m1-cB_1u07-a1-m1-cA
4 1ihr-a1-m1-cA 73 73 0.9865 1.0000 1.0000 1.46e-49 1ihr-a1-m1-cA_1ihr-a1-m1-cB
5 7zc8-a1-m1-cB 86 74 0.4730 0.4070 0.4730 2.87e-18 7zc8-a1-m1-cB_7zc8-a1-m1-cA
6 7zc8-a1-m1-cA 87 74 0.4730 0.4023 0.4730 3.40e-18 7zc8-a1-m1-cB_7zc8-a1-m1-cA
7 1t3c-a1-m1-cA 411 56 0.2432 0.0438 0.3214 2.9 1t3c-a1-m1-cB_1t3c-a1-m1-cA
8 1t3c-a1-m1-cB 409 56 0.2432 0.0440 0.3214 3.1 1t3c-a1-m1-cB_1t3c-a1-m1-cA
9 4zvb-a2-m1-cC 150 49 0.2162 0.1067 0.3265 6.8 4zvb-a2-m1-cD_4zvb-a2-m1-cC
10 4zvb-a2-m1-cD 149 49 0.2162 0.1074 0.3265 7.1 4zvb-a2-m1-cD_4zvb-a2-m1-cC
11 3o4y-a1-m2-cA 172 44 0.1892 0.0814 0.3182 7.6 3o4y-a1-m1-cA_3o4y-a1-m2-cA
12 3o4y-a1-m1-cA 172 44 0.1892 0.0814 0.3182 7.6 3o4y-a1-m1-cA_3o4y-a1-m2-cA
13 7wm3-a2-m1-cD 179 37 0.1757 0.0726 0.3514 8.0 7wm3-a2-m1-cB_7wm3-a2-m1-cD
14 7wm3-a2-m1-cB 179 37 0.1757 0.0726 0.3514 8.0 7wm3-a2-m1-cB_7wm3-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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