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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
ARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPLI
VKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yvz-a1-m2-cA 63 63 1.0000 1.0000 1.0000 1.17e-42 7yvz-a1-m1-cA_7yvz-a1-m2-cA
2 7yvz-a1-m1-cA 63 63 1.0000 1.0000 1.0000 1.17e-42 7yvz-a1-m1-cA_7yvz-a1-m2-cA
3 4f1e-a8-m1-cP 63 59 0.5873 0.5873 0.6271 8.97e-25 4f1e-a8-m1-cO_4f1e-a8-m1-cP
4 4f1e-a8-m1-cO 62 59 0.5873 0.5968 0.6271 9.65e-25 4f1e-a8-m1-cO_4f1e-a8-m1-cP
5 4ooa-a2-m1-cD 64 60 0.5397 0.5312 0.5667 9.61e-20 4ooa-a2-m1-cC_4ooa-a2-m1-cD
6 4ooa-a2-m1-cC 64 60 0.5397 0.5312 0.5667 9.61e-20 4ooa-a2-m1-cC_4ooa-a2-m1-cD
7 3s2q-a2-m2-cB 65 60 0.4603 0.4462 0.4833 1.42e-16 3s2q-a2-m1-cA_3s2q-a2-m2-cB, 3s2q-a2-m2-cA_3s2q-a2-m2-cB
8 3s2q-a2-m2-cA 65 60 0.4603 0.4462 0.4833 1.42e-16 3s2q-a2-m2-cA_3s2q-a2-m2-cB
9 3s2q-a2-m1-cA 65 60 0.4603 0.4462 0.4833 1.42e-16 3s2q-a2-m1-cA_3s2q-a2-m2-cB
10 3tbo-a1-m2-cA 54 19 0.1587 0.1852 0.5263 0.12 3tbo-a1-m1-cA_3tbo-a1-m2-cA
11 3tbo-a1-m1-cA 54 19 0.1587 0.1852 0.5263 0.12 3tbo-a1-m1-cA_3tbo-a1-m2-cA
12 3tbm-a1-m1-cB 61 17 0.1587 0.1639 0.5882 0.29 3tbm-a1-m1-cA_3tbm-a1-m1-cB
13 3tbm-a1-m1-cA 61 17 0.1587 0.1639 0.5882 0.29 3tbm-a1-m1-cA_3tbm-a1-m1-cB
14 3mab-a1-m1-cB 88 19 0.1270 0.0909 0.4211 1.3 3mab-a1-m1-cA_3mab-a1-m1-cB
15 3mab-a1-m1-cA 85 19 0.1270 0.0941 0.4211 1.4 3mab-a1-m1-cA_3mab-a1-m1-cB
16 3bqt-a1-m1-cA 81 19 0.1270 0.0988 0.4211 1.5 3bqt-a1-m1-cB_3bqt-a1-m1-cA
17 3bqt-a1-m1-cB 80 19 0.1270 0.1000 0.4211 1.6 3bqt-a1-m1-cB_3bqt-a1-m1-cA
18 5xea-a1-m1-cA 385 29 0.2222 0.0364 0.4828 5.0 5xea-a1-m1-cA_5xea-a1-m1-cC
19 6deb-a1-m1-cB 284 22 0.1429 0.0317 0.4091 9.9 6deb-a1-m1-cA_6deb-a1-m1-cB
20 6deb-a1-m1-cA 284 22 0.1429 0.0317 0.4091 9.9 6deb-a1-m1-cA_6deb-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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