Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
ARKYEIYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYI
LNVNANAEAINEFDRLAKINEDILRHIVVKEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3r3t-a1-m1-cA 92 92 1.0000 1.0000 1.0000 8.59e-61 3r3t-a1-m2-cB_3r3t-a1-m1-cA
2 3r3t-a1-m2-cB 91 91 0.9891 1.0000 1.0000 4.28e-60 3r3t-a1-m1-cB_3r3t-a1-m2-cB, 3r3t-a1-m2-cB_3r3t-a1-m1-cA
3 3r3t-a1-m1-cB 91 91 0.9891 1.0000 1.0000 4.28e-60 3r3t-a1-m1-cB_3r3t-a1-m2-cB
4 4pw0-a1-m2-cA 269 52 0.1087 0.0372 0.1923 0.12 4pw0-a1-m1-cA_4pw0-a1-m2-cA
5 4pw0-a1-m1-cA 269 52 0.1087 0.0372 0.1923 0.12 4pw0-a1-m1-cA_4pw0-a1-m2-cA
6 5gvw-a2-m1-cA 390 31 0.1413 0.0333 0.4194 1.4 5gvw-a2-m1-cB_5gvw-a2-m1-cA
7 5gvw-a2-m1-cB 389 31 0.1413 0.0334 0.4194 1.4 5gvw-a2-m1-cB_5gvw-a2-m1-cA
8 2p7j-a1-m1-cA 262 36 0.1196 0.0420 0.3056 7.8 2p7j-a1-m1-cA_2p7j-a1-m1-cB
9 2p7j-a1-m1-cB 271 36 0.1196 0.0406 0.3056 7.9 2p7j-a1-m1-cA_2p7j-a1-m1-cB
10 1wzl-a1-m1-cB 585 46 0.1522 0.0239 0.3043 9.3 1wzl-a1-m1-cA_1wzl-a1-m1-cB
11 1wzl-a1-m1-cA 585 46 0.1522 0.0239 0.3043 9.3 1wzl-a1-m1-cA_1wzl-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600