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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
ARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYS
RRINHEHRLVYTVDDNHIKIASCKYHY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7cua-a1-m1-cC 87 87 1.0000 1.0000 1.0000 1.24e-61 7cua-a1-m1-cA_7cua-a1-m1-cC
2 7cua-a1-m1-cB 87 87 1.0000 1.0000 1.0000 1.24e-61 7cua-a1-m1-cA_7cua-a1-m1-cB
3 7cua-a1-m1-cA 87 87 1.0000 1.0000 1.0000 1.24e-61 7cua-a1-m1-cA_7cua-a1-m1-cB, 7cua-a1-m1-cA_7cua-a1-m1-cC
4 4v8x-a2-m1-cCZ 84 85 0.5172 0.5357 0.5294 3.38e-30 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
5 4v8x-a2-m1-cCY 84 85 0.5172 0.5357 0.5294 3.38e-30 4v8x-a2-m1-cCY_4v8x-a2-m1-cCZ
6 6n90-a1-m1-cB 86 87 0.3793 0.3837 0.3793 1.70e-22 6n90-a1-m1-cB_6n90-a1-m1-cA
7 6n90-a1-m1-cA 88 89 0.3793 0.3750 0.3708 2.11e-22 6n90-a1-m1-cB_6n90-a1-m1-cA
8 8bt1-a1-m1-cC 123 61 0.1609 0.1138 0.2295 0.96 8bt1-a1-m1-cA_8bt1-a1-m1-cC, 8bt1-a1-m1-cC_8bt1-a1-m1-cD
9 8bt1-a1-m1-cA 123 61 0.1609 0.1138 0.2295 0.99 8bt1-a1-m1-cA_8bt1-a1-m1-cC
10 8bt1-a1-m1-cD 126 61 0.1609 0.1111 0.2295 1.1 8bt1-a1-m1-cC_8bt1-a1-m1-cD, 8bt1-a1-m1-cD_8bt1-a1-m1-cB
11 8bt1-a1-m1-cB 127 61 0.1609 0.1102 0.2295 1.2 8bt1-a1-m1-cD_8bt1-a1-m1-cB
12 3inp-a4-m15-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a4-m1-cA_3inp-a4-m15-cA
13 3inp-a4-m1-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a4-m1-cA_3inp-a4-m15-cA
14 3inp-a3-m8-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a3-m6-cA_3inp-a3-m8-cA
15 3inp-a3-m6-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a3-m6-cA_3inp-a3-m8-cA
16 3inp-a1-m9-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a1-m12-cA_3inp-a1-m9-cA
17 3inp-a1-m12-cA 218 50 0.1954 0.0780 0.3400 1.3 3inp-a1-m12-cA_3inp-a1-m9-cA
18 2c0r-a1-m1-cB 361 27 0.1264 0.0305 0.4074 1.7 2c0r-a1-m1-cA_2c0r-a1-m1-cB
19 2c0r-a1-m1-cA 361 27 0.1264 0.0305 0.4074 1.7 2c0r-a1-m1-cA_2c0r-a1-m1-cB
20 1bw0-a1-m1-cA 411 61 0.1724 0.0365 0.2459 4.1 1bw0-a1-m1-cA_1bw0-a1-m1-cB
21 1bw0-a1-m1-cB 412 61 0.1724 0.0364 0.2459 4.1 1bw0-a1-m1-cA_1bw0-a1-m1-cB
22 6ynz-a1-m1-ci4 68 31 0.1379 0.1765 0.3871 8.9 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4

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Reference:
Jacob Schwartz et al.

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