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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
ARPCRVSTADRKVRKGIMAHSLEDLLNKVQDILKLKDKPFSLVLEEDGTIVETEEYFQAL
AKDTMFMVLLKGQKWKPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4mac-a1-m1-cB 78 78 1.0000 1.0000 1.0000 9.85e-54 4mac-a1-m1-cB_4mac-a1-m1-cA
2 4mac-a1-m1-cA 82 78 1.0000 0.9512 1.0000 1.21e-53 4mac-a1-m1-cB_4mac-a1-m1-cA
3 3o5b-a1-m1-cA 479 33 0.1795 0.0292 0.4242 1.3 3o5b-a1-m1-cB_3o5b-a1-m1-cA
4 3o5b-a1-m1-cB 478 33 0.1795 0.0293 0.4242 1.3 3o5b-a1-m1-cB_3o5b-a1-m1-cA
5 7xof-a1-m1-cA 924 49 0.1923 0.0162 0.3061 3.2 7xof-a1-m1-cA_7xof-a1-m1-cB
6 7xof-a1-m1-cB 927 49 0.1923 0.0162 0.3061 3.3 7xof-a1-m1-cA_7xof-a1-m1-cB
7 3fsg-a4-m1-cC 260 33 0.1667 0.0500 0.3939 4.3 3fsg-a4-m1-cC_3fsg-a4-m1-cA
8 3fsg-a4-m1-cB 260 33 0.1667 0.0500 0.3939 4.3 3fsg-a4-m1-cB_3fsg-a4-m1-cA
9 3fsg-a4-m1-cA 261 33 0.1667 0.0498 0.3939 4.3 3fsg-a4-m1-cB_3fsg-a4-m1-cA, 3fsg-a4-m1-cC_3fsg-a4-m1-cA
10 7ckf-a1-m1-cA 256 37 0.1923 0.0586 0.4054 8.1 7ckf-a1-m1-cA_7ckf-a1-m1-cB
11 2a5w-a4-m1-cC 114 42 0.2179 0.1491 0.4048 9.1 2a5w-a4-m1-cB_2a5w-a4-m1-cC
12 2a5w-a4-m1-cB 114 42 0.2179 0.1491 0.4048 9.1 2a5w-a4-m1-cB_2a5w-a4-m1-cC
13 2zau-a1-m1-cB 303 48 0.1667 0.0429 0.2708 9.6 2zau-a1-m1-cB_2zau-a1-m2-cC
14 2zau-a1-m2-cC 304 48 0.1667 0.0428 0.2708 9.6 2zau-a1-m1-cB_2zau-a1-m2-cC, 2zau-a1-m2-cC_2zau-a1-m1-cA
15 2zau-a1-m1-cA 307 48 0.1667 0.0423 0.2708 9.7 2zau-a1-m2-cC_2zau-a1-m1-cA
16 1aip-a2-m1-cH 194 67 0.2564 0.1031 0.2985 9.9 1aip-a2-m1-cH_1aip-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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