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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
ASDDELFSMLDQRFGGGEDLLMSGDNGMTEEKLRRYLKRTVTELDSVTARLREVEHRAGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pzr-a1-m1-cB 60 60 1.0000 1.0000 1.0000 1.10e-37 1pzr-a1-m1-cA_1pzr-a1-m1-cB
2 1pzr-a1-m1-cA 60 60 1.0000 1.0000 1.0000 1.10e-37 1pzr-a1-m1-cA_1pzr-a1-m1-cB
3 2hg4-a1-m1-cB 867 31 0.5167 0.0358 1.0000 6.46e-14 2hg4-a1-m1-cA_2hg4-a1-m1-cB
4 2hg4-a1-m1-cA 867 31 0.5167 0.0358 1.0000 6.46e-14 2hg4-a1-m1-cA_2hg4-a1-m1-cB
5 6twv-a2-m1-cJ 172 28 0.1833 0.0640 0.3929 0.044 6twv-a2-m1-cH_6twv-a2-m1-cJ
6 6twv-a2-m1-cH 172 28 0.1833 0.0640 0.3929 0.044 6twv-a2-m1-cH_6twv-a2-m1-cJ
7 7s6b-a1-m1-cB 879 31 0.2167 0.0148 0.4194 0.39 7s6b-a1-m1-cB_7s6b-a1-m1-cA
8 7tzg-a1-m1-cC 354 13 0.1667 0.0282 0.7692 0.74 7tzg-a1-m1-cC_7tzg-a1-m1-cD
9 7tzg-a1-m1-cD 373 13 0.1667 0.0268 0.7692 0.75 7tzg-a1-m1-cC_7tzg-a1-m1-cD
10 7e6g-a1-m1-cA 264 57 0.3667 0.0833 0.3860 3.1 7e6g-a1-m1-cB_7e6g-a1-m1-cA
11 7e6g-a1-m1-cB 260 57 0.3667 0.0846 0.3860 3.8 7e6g-a1-m1-cB_7e6g-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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