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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
ASFRDFASNNSTAFRDAVELALNENGTTLKSLGNS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7zqb-a1-m1-cg 35 35 1.0000 1.0000 1.0000 2.63e-18 7zqb-a1-m1-cf_7zqb-a1-m1-cg
2 7zqb-a1-m1-cf 35 35 1.0000 1.0000 1.0000 2.63e-18 7zqb-a1-m1-cf_7zqb-a1-m1-cg
3 2ns8-a3-m2-cC 206 17 0.2286 0.0388 0.4706 7.1 2ns8-a3-m1-cA_2ns8-a3-m2-cC, 2ns8-a3-m2-cD_2ns8-a3-m2-cC
4 2ns8-a3-m2-cD 198 17 0.2286 0.0404 0.4706 7.4 2ns8-a3-m2-cD_2ns8-a3-m1-cA, 2ns8-a3-m2-cD_2ns8-a3-m2-cC
5 2ns8-a3-m1-cA 200 17 0.2286 0.0400 0.4706 7.4 2ns8-a3-m1-cA_2ns8-a3-m2-cC, 2ns8-a3-m2-cD_2ns8-a3-m1-cA
6 5dpo-a1-m2-cA 101 38 0.3429 0.1188 0.3158 7.6 5dpo-a1-m1-cA_5dpo-a1-m2-cA
7 5dpo-a1-m1-cA 101 38 0.3429 0.1188 0.3158 7.6 5dpo-a1-m1-cA_5dpo-a1-m2-cA
8 6nki-a1-m2-cA 356 25 0.2857 0.0281 0.4000 8.2 6nki-a1-m1-cA_6nki-a1-m2-cA
9 6nki-a1-m1-cA 356 25 0.2857 0.0281 0.4000 8.2 6nki-a1-m1-cA_6nki-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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