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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
ASIEQLLERQWSEGQQFLLEQGTPSDILGLKSLHQLQVENRRLEEQIKNLTAKKERLQLL
NAQLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ckn-a1-m1-cB 65 65 1.0000 1.0000 1.0000 1.31e-39 6ckn-a1-m1-cA_6ckn-a1-m1-cB
2 6ckn-a1-m1-cA 65 65 1.0000 1.0000 1.0000 1.31e-39 6ckn-a1-m1-cA_6ckn-a1-m1-cB
3 6cko-a1-m1-cA 66 66 1.0000 0.9848 0.9848 5.63e-38 6cko-a1-m1-cA_6cko-a1-m4-cB
4 6cko-a1-m4-cB 67 66 1.0000 0.9701 0.9848 5.79e-38 6cko-a1-m1-cA_6cko-a1-m4-cB
5 6jn2-a1-m4-cA 67 65 0.9846 0.9552 0.9846 4.51e-37 6jn2-a1-m1-cA_6jn2-a1-m4-cA, 6jn2-a1-m2-cA_6jn2-a1-m4-cA, 6jn2-a1-m3-cA_6jn2-a1-m4-cA
6 6jn2-a1-m3-cA 67 65 0.9846 0.9552 0.9846 4.51e-37 6jn2-a1-m3-cA_6jn2-a1-m4-cA
7 6jn2-a1-m2-cA 67 65 0.9846 0.9552 0.9846 4.51e-37 6jn2-a1-m2-cA_6jn2-a1-m4-cA
8 6jn2-a1-m1-cA 67 65 0.9846 0.9552 0.9846 4.51e-37 6jn2-a1-m1-cA_6jn2-a1-m4-cA
9 2gbb-a2-m1-cD 151 34 0.2000 0.0861 0.3824 0.82 2gbb-a2-m1-cD_2gbb-a2-m1-cC
10 2gbb-a2-m1-cC 152 34 0.2000 0.0855 0.3824 0.84 2gbb-a2-m1-cD_2gbb-a2-m1-cC
11 6k8h-a1-m1-cA 438 42 0.1692 0.0251 0.2619 2.8 6k8h-a1-m1-cA_6k8h-a1-m1-cB
12 6k8h-a1-m1-cB 441 42 0.1692 0.0249 0.2619 2.9 6k8h-a1-m1-cA_6k8h-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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