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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
ASIEQLLERQWSEGQQFLLEQGTPSDILGMLKSLHQLQVENRRLEEQIKNLTAKKERLQL
LNAQLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6cko-a1-m4-cB 67 66 1.0000 0.9851 1.0000 7.85e-41 6cko-a1-m1-cA_6cko-a1-m4-cB
2 6cko-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.10e-40 6cko-a1-m1-cA_6cko-a1-m4-cB
3 6jn2-a1-m4-cA 67 65 0.9848 0.9701 1.0000 6.61e-40 6jn2-a1-m1-cA_6jn2-a1-m4-cA, 6jn2-a1-m2-cA_6jn2-a1-m4-cA, 6jn2-a1-m3-cA_6jn2-a1-m4-cA
4 6jn2-a1-m3-cA 67 65 0.9848 0.9701 1.0000 6.61e-40 6jn2-a1-m3-cA_6jn2-a1-m4-cA
5 6jn2-a1-m2-cA 67 65 0.9848 0.9701 1.0000 6.61e-40 6jn2-a1-m2-cA_6jn2-a1-m4-cA
6 6jn2-a1-m1-cA 67 65 0.9848 0.9701 1.0000 6.61e-40 6jn2-a1-m1-cA_6jn2-a1-m4-cA
7 6ckn-a1-m1-cB 65 66 0.9848 1.0000 0.9848 5.72e-38 6ckn-a1-m1-cA_6ckn-a1-m1-cB
8 6ckn-a1-m1-cA 65 66 0.9848 1.0000 0.9848 5.72e-38 6ckn-a1-m1-cA_6ckn-a1-m1-cB
9 1yab-a3-m2-cB 87 43 0.2424 0.1839 0.3721 2.7 1yab-a3-m1-cA_1yab-a3-m2-cB, 1yab-a3-m2-cA_1yab-a3-m2-cB
10 5na2-a1-m1-cB 211 41 0.1667 0.0521 0.2683 3.4 5na2-a1-m1-cA_5na2-a1-m1-cB
11 5na2-a1-m1-cA 211 41 0.1667 0.0521 0.2683 3.4 5na2-a1-m1-cA_5na2-a1-m1-cB
12 2nlz-a1-m1-cC 535 31 0.1667 0.0206 0.3548 3.5 2nlz-a1-m1-cC_2nlz-a1-m1-cD
13 2nlz-a1-m1-cB 535 31 0.1667 0.0206 0.3548 3.5 2nlz-a1-m1-cB_2nlz-a1-m1-cD
14 2nlz-a1-m1-cD 537 31 0.1667 0.0205 0.3548 3.5 2nlz-a1-m1-cB_2nlz-a1-m1-cD, 2nlz-a1-m1-cC_2nlz-a1-m1-cD
15 7n9u-a1-m2-cB 214 44 0.2121 0.0654 0.3182 5.2 7n9u-a1-m2-cA_7n9u-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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