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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
ASKFGIGQQVRHSLLGYLGVVVDIDPVAAPWYHVVEDDNGLPVHTYLAEAQLSSELQDEH
PEQPSDELAQTIRKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ycq-a1-m3-cA 75 75 1.0000 1.0000 1.0000 6.61e-51 5ycq-a1-m2-cA_5ycq-a1-m3-cA
2 5ycq-a1-m2-cA 75 75 1.0000 1.0000 1.0000 6.61e-51 5ycq-a1-m2-cA_5ycq-a1-m3-cA
3 5bwe-a1-m1-cD 857 38 0.1733 0.0152 0.3421 1.3 5bwe-a1-m1-cA_5bwe-a1-m1-cD
4 5bwe-a1-m1-cA 857 38 0.1733 0.0152 0.3421 1.3 5bwe-a1-m1-cA_5bwe-a1-m1-cD
5 3u5w-a1-m2-cA 126 29 0.1467 0.0873 0.3793 2.7 3u5w-a1-m1-cA_3u5w-a1-m2-cA
6 3u5w-a1-m1-cA 126 29 0.1467 0.0873 0.3793 2.7 3u5w-a1-m1-cA_3u5w-a1-m2-cA
7 1koa-a1-m2-cA 447 50 0.1600 0.0268 0.2400 3.5 1koa-a1-m1-cA_1koa-a1-m2-cA
8 1koa-a1-m1-cA 447 50 0.1600 0.0268 0.2400 3.5 1koa-a1-m1-cA_1koa-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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