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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
ASKKVHQINVKGFFDDVEVTEQTKEAEYTYDFKEILSEFNGKNVSITVKEENELPVKGVE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2h4o-a1-m2-cD 60 60 1.0000 1.0000 1.0000 1.66e-37 2h4o-a1-m1-cB_2h4o-a1-m2-cD, 2h4o-a1-m1-cD_2h4o-a1-m2-cD, 2h4o-a1-m2-cB_2h4o-a1-m2-cD
2 2h4o-a1-m2-cB 60 60 1.0000 1.0000 1.0000 1.66e-37 2h4o-a1-m2-cB_2h4o-a1-m2-cD
3 2h4o-a1-m1-cD 60 60 1.0000 1.0000 1.0000 1.66e-37 2h4o-a1-m1-cD_2h4o-a1-m2-cD
4 2h4o-a1-m1-cB 60 60 1.0000 1.0000 1.0000 1.66e-37 2h4o-a1-m1-cB_2h4o-a1-m2-cD
5 4xvg-a1-m2-cA 519 41 0.2167 0.0250 0.3171 0.96 4xvg-a1-m1-cA_4xvg-a1-m2-cA
6 4xvg-a1-m1-cA 519 41 0.2167 0.0250 0.3171 0.96 4xvg-a1-m1-cA_4xvg-a1-m2-cA
7 4ykg-a1-m2-cA 520 41 0.2167 0.0250 0.3171 0.98 4ykg-a1-m1-cA_4ykg-a1-m2-cA
8 4ykg-a1-m1-cA 520 41 0.2167 0.0250 0.3171 0.98 4ykg-a1-m1-cA_4ykg-a1-m2-cA
9 1hyu-a1-m2-cA 521 41 0.2167 0.0250 0.3171 1.2 1hyu-a1-m1-cA_1hyu-a1-m2-cA
10 1hyu-a1-m1-cA 521 41 0.2167 0.0250 0.3171 1.2 1hyu-a1-m1-cA_1hyu-a1-m2-cA
11 3o7x-a3-m3-cD 110 40 0.2833 0.1545 0.4250 1.5 3o7x-a3-m1-cD_3o7x-a3-m3-cD
12 3o7x-a3-m1-cD 110 40 0.2833 0.1545 0.4250 1.5 3o7x-a3-m1-cD_3o7x-a3-m3-cD
13 2ygq-a1-m3-cA 241 30 0.1833 0.0456 0.3667 4.0 2ygq-a1-m2-cA_2ygq-a1-m3-cA
14 2ygq-a1-m2-cA 241 30 0.1833 0.0456 0.3667 4.0 2ygq-a1-m2-cA_2ygq-a1-m3-cA
15 3s0w-a2-m2-cA 157 26 0.1833 0.0701 0.4231 5.1 3s0w-a2-m2-cA_3s0w-a2-m2-cB
16 3s0w-a2-m1-cA 157 26 0.1833 0.0701 0.4231 5.1 3s0w-a2-m1-cA_3s0w-a2-m2-cB
17 3s0w-a2-m2-cB 159 26 0.1833 0.0692 0.4231 5.1 3s0w-a2-m1-cA_3s0w-a2-m2-cB, 3s0w-a2-m2-cA_3s0w-a2-m2-cB
18 5mv0-a2-m1-cB 206 24 0.1833 0.0534 0.4583 5.2 5mv0-a2-m3-cA_5mv0-a2-m1-cB, 5mv0-a2-m3-cC_5mv0-a2-m1-cB
19 3s0y-a2-m2-cA 189 26 0.1833 0.0582 0.4231 5.3 3s0y-a2-m1-cA_3s0y-a2-m2-cA
20 3s0y-a2-m1-cA 189 26 0.1833 0.0582 0.4231 5.3 3s0y-a2-m1-cA_3s0y-a2-m2-cA
21 3imp-a7-m1-cC 133 26 0.1833 0.0827 0.4231 5.3 3imp-a7-m1-cI_3imp-a7-m1-cC
22 3cyq-a11-m1-cN 134 26 0.1833 0.0821 0.4231 5.3 3cyq-a11-m1-cO_3cyq-a11-m1-cN
23 3imp-a7-m1-cA 131 26 0.1833 0.0840 0.4231 5.4 3imp-a7-m1-cA_3imp-a7-m1-cK
24 3imp-a7-m1-cI 132 26 0.1833 0.0833 0.4231 5.4 3imp-a7-m1-cE_3imp-a7-m1-cI, 3imp-a7-m1-cI_3imp-a7-m1-cC
25 3imp-a7-m1-cE 132 26 0.1833 0.0833 0.4231 5.4 3imp-a7-m1-cE_3imp-a7-m1-cI
26 3cyq-a6-m1-cI 132 26 0.1833 0.0833 0.4231 5.4 3cyq-a6-m1-cH_3cyq-a6-m1-cI
27 3cyq-a6-m1-cH 132 26 0.1833 0.0833 0.4231 5.4 3cyq-a6-m1-cH_3cyq-a6-m1-cI
28 3cyq-a11-m1-cO 132 26 0.1833 0.0833 0.4231 5.4 3cyq-a11-m1-cO_3cyq-a11-m1-cN
29 3imp-a7-m1-cK 131 26 0.1833 0.0840 0.4231 5.5 3imp-a7-m1-cA_3imp-a7-m1-cK
30 5gqz-a2-m2-cA 755 28 0.2000 0.0159 0.4286 6.9 5gqz-a2-m1-cA_5gqz-a2-m2-cA
31 5gqz-a2-m1-cA 755 28 0.2000 0.0159 0.4286 6.9 5gqz-a2-m1-cA_5gqz-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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