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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
ASLKEIIDELGKQAKEQNKIASRILKIKGIKRIVVQLNAVPKIRYSTIHSQNNFRKQIGI
TPQDAEDLKLIAEFLEKYSDFLNEYVKFTP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2x5g-a1-m2-cA 90 90 1.0000 1.0000 1.0000 4.06e-61 2x5g-a1-m1-cA_2x5g-a1-m2-cA
2 2x5g-a1-m1-cA 90 90 1.0000 1.0000 1.0000 4.06e-61 2x5g-a1-m1-cA_2x5g-a1-m2-cA
3 2x5h-a1-m1-cD 94 93 0.9778 0.9362 0.9462 5.62e-56 2x5h-a1-m1-cA_2x5h-a1-m1-cD
4 2x5h-a1-m1-cA 92 90 0.9444 0.9239 0.9444 1.67e-53 2x5h-a1-m1-cA_2x5h-a1-m1-cD
5 7m92-a1-m1-cB 358 40 0.1667 0.0419 0.3750 1.8 7m92-a1-m1-cA_7m92-a1-m1-cB
6 7m92-a1-m1-cA 358 40 0.1667 0.0419 0.3750 1.8 7m92-a1-m1-cA_7m92-a1-m1-cB
7 1r9d-a1-m1-cB 786 41 0.1667 0.0191 0.3659 2.7 1r9d-a1-m1-cA_1r9d-a1-m1-cB
8 1r9d-a1-m1-cA 786 41 0.1667 0.0191 0.3659 2.7 1r9d-a1-m1-cA_1r9d-a1-m1-cB
9 3bzw-a3-m1-cE 239 35 0.1222 0.0460 0.3143 3.2 3bzw-a3-m1-cD_3bzw-a3-m1-cE
10 3bzw-a3-m1-cD 239 35 0.1222 0.0460 0.3143 3.2 3bzw-a3-m1-cD_3bzw-a3-m1-cE
11 3bzw-a1-m1-cE 239 35 0.1222 0.0460 0.3143 3.2 3bzw-a1-m1-cC_3bzw-a1-m1-cE
12 3bzw-a1-m1-cC 239 35 0.1222 0.0460 0.3143 3.2 3bzw-a1-m1-cC_3bzw-a1-m1-cE
13 4g6q-a4-m2-cA 174 20 0.1000 0.0517 0.4500 4.6 4g6q-a4-m2-cB_4g6q-a4-m2-cA
14 4g6q-a4-m1-cA 174 20 0.1000 0.0517 0.4500 4.6 4g6q-a4-m2-cB_4g6q-a4-m1-cA
15 4g6q-a4-m2-cB 165 20 0.1000 0.0545 0.4500 4.7 4g6q-a4-m1-cB_4g6q-a4-m2-cB, 4g6q-a4-m2-cB_4g6q-a4-m1-cA, 4g6q-a4-m2-cB_4g6q-a4-m2-cA
16 4g6q-a4-m1-cB 165 20 0.1000 0.0545 0.4500 4.7 4g6q-a4-m1-cB_4g6q-a4-m2-cB
17 1qo8-a1-m1-cD 564 30 0.1556 0.0248 0.4667 7.1 1qo8-a1-m1-cA_1qo8-a1-m1-cD
18 1qo8-a1-m1-cA 564 30 0.1556 0.0248 0.4667 7.1 1qo8-a1-m1-cA_1qo8-a1-m1-cD
19 8dk1-a1-m1-cG 176 27 0.1222 0.0625 0.4074 7.3 8dk1-a1-m1-cG_8dk1-a1-m1-cH
20 8dk1-a1-m1-cH 189 27 0.1222 0.0582 0.4074 8.1 8dk1-a1-m1-cG_8dk1-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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