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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
ASNSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQANLYLSTPIDTMYYLTLEAKDGG
KKKLYEAKVWVKHIMYYPKTANFKELQEFKPVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5a0o-a1-m1-cS 93 93 1.0000 1.0000 1.0000 1.23e-64 5a0o-a1-m1-cB_5a0o-a1-m1-cS
2 5a0o-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.23e-64 5a0o-a1-m1-cB_5a0o-a1-m1-cS
3 5ohv-a1-m1-cD 90 90 0.7634 0.7889 0.7889 1.21e-42 5ohv-a1-m1-cB_5ohv-a1-m1-cD
4 5ohv-a1-m1-cB 89 90 0.7634 0.7978 0.7889 1.35e-42 5ohv-a1-m1-cB_5ohv-a1-m1-cD
5 5ohl-a4-m1-cE 89 90 0.7742 0.8090 0.8000 2.03e-41 5ohl-a4-m1-cB_5ohl-a4-m1-cE
6 5ohl-a4-m1-cB 89 90 0.7742 0.8090 0.8000 2.03e-41 5ohl-a4-m1-cB_5ohl-a4-m1-cE
7 4tx4-a1-m1-cA 83 91 0.6129 0.6867 0.6264 2.57e-30 4tx4-a1-m1-cB_4tx4-a1-m1-cA
8 4tx4-a1-m1-cB 79 90 0.6022 0.7089 0.6222 1.82e-29 4tx4-a1-m1-cB_4tx4-a1-m1-cA
9 7c03-a2-m2-cA 312 95 0.6774 0.2019 0.6632 1.35e-26 7c03-a2-m1-cA_7c03-a2-m2-cA
10 7c03-a2-m1-cA 312 95 0.6774 0.2019 0.6632 1.35e-26 7c03-a2-m1-cA_7c03-a2-m2-cA
11 6vlp-a1-m2-cA 80 88 0.5591 0.6500 0.5909 1.67e-26 6vlp-a1-m1-cA_6vlp-a1-m2-cA
12 6vlp-a1-m1-cA 80 88 0.5591 0.6500 0.5909 1.67e-26 6vlp-a1-m1-cA_6vlp-a1-m2-cA
13 3ul5-a1-m1-cA 82 92 0.5161 0.5854 0.5217 7.86e-22 3ul5-a1-m1-cB_3ul5-a1-m1-cA
14 3ul5-a1-m1-cB 81 92 0.5161 0.5926 0.5217 8.53e-22 3ul5-a1-m1-cB_3ul5-a1-m1-cA
15 5kux-a2-m2-cA 92 93 0.3763 0.3804 0.3763 2.08e-08 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 93 0.3763 0.3804 0.3763 2.08e-08 5kux-a2-m1-cA_5kux-a2-m2-cA
17 3qne-a1-m2-cA 441 28 0.1613 0.0340 0.5357 3.5 3qne-a1-m1-cA_3qne-a1-m2-cA
18 3qne-a1-m1-cA 441 28 0.1613 0.0340 0.5357 3.5 3qne-a1-m1-cA_3qne-a1-m2-cA
19 4k0j-a2-m1-cE 954 61 0.2043 0.0199 0.3115 4.4 4k0j-a2-m1-cE_4k0j-a2-m1-cD
20 4k0j-a2-m1-cD 958 61 0.2043 0.0198 0.3115 4.4 4k0j-a2-m1-cE_4k0j-a2-m1-cD
21 6fqm-a1-m1-cA 481 49 0.1613 0.0312 0.3061 5.2 6fqm-a1-m1-cC_6fqm-a1-m1-cA
22 2xcq-a1-m2-cA 652 49 0.1613 0.0230 0.3061 5.2 2xcq-a1-m1-cA_2xcq-a1-m2-cA
23 2xcq-a1-m1-cA 652 49 0.1613 0.0230 0.3061 5.2 2xcq-a1-m1-cA_2xcq-a1-m2-cA
24 6fqm-a1-m1-cC 480 49 0.1613 0.0312 0.3061 5.3 6fqm-a1-m1-cC_6fqm-a1-m1-cA
25 5bs3-a1-m1-cD 670 49 0.1613 0.0224 0.3061 5.3 5bs3-a1-m1-cB_5bs3-a1-m1-cD
26 5bs3-a1-m1-cB 670 49 0.1613 0.0224 0.3061 5.3 5bs3-a1-m1-cB_5bs3-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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