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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK
KIIEKMLNSDKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1msh-a1-m1-cB 72 72 1.0000 1.0000 1.0000 4.74e-48 1msh-a1-m1-cA_1msh-a1-m1-cB
2 1msh-a1-m1-cA 72 72 1.0000 1.0000 1.0000 4.74e-48 1msh-a1-m1-cA_1msh-a1-m1-cB
3 6wzj-a1-m1-cE 63 63 0.8056 0.9206 0.9206 5.54e-38 6wzj-a1-m1-cF_6wzj-a1-m1-cE
4 6wzk-a1-m1-cF 64 63 0.7778 0.8750 0.8889 8.20e-37 6wzk-a1-m1-cE_6wzk-a1-m1-cF
5 6wzk-a1-m1-cE 64 63 0.7778 0.8750 0.8889 8.20e-37 6wzk-a1-m1-cE_6wzk-a1-m1-cF
6 6wzj-a1-m1-cF 59 62 0.7500 0.9153 0.8710 1.01e-32 6wzj-a1-m1-cF_6wzj-a1-m1-cE
7 1mi2-a1-m1-cB 73 72 0.6528 0.6438 0.6528 2.93e-29 1mi2-a1-m1-cA_1mi2-a1-m1-cB
8 1mi2-a1-m1-cA 73 72 0.6528 0.6438 0.6528 2.93e-29 1mi2-a1-m1-cA_1mi2-a1-m1-cB
9 3n52-a3-m1-cB 71 70 0.6389 0.6479 0.6571 6.98e-29 3n52-a3-m1-cD_3n52-a3-m1-cB
10 3n52-a3-m1-cD 70 68 0.6389 0.6571 0.6765 1.27e-28 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
11 3n52-a3-m1-cC 67 67 0.6111 0.6567 0.6567 2.45e-27 3n52-a3-m1-cC_3n52-a3-m1-cD
12 1rod-a1-m1-cB 72 70 0.6250 0.6250 0.6429 4.54e-27 1rod-a1-m1-cA_1rod-a1-m1-cB
13 1rod-a1-m1-cA 72 70 0.6250 0.6250 0.6429 4.54e-27 1rod-a1-m1-cA_1rod-a1-m1-cB
14 1tvx-a1-m1-cD 71 70 0.5556 0.5634 0.5714 5.83e-25 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
15 1tvx-a1-m1-cB 71 70 0.5556 0.5634 0.5714 5.83e-25 1tvx-a1-m1-cB_1tvx-a1-m1-cD
16 1tvx-a1-m1-cC 64 64 0.5417 0.6094 0.6094 1.12e-23 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
17 1tvx-a1-m1-cA 64 64 0.5417 0.6094 0.6094 1.12e-23 1tvx-a1-m1-cA_1tvx-a1-m1-cC
18 2mgs-a1-m1-cB 71 64 0.4722 0.4789 0.5312 2.18e-22 2mgs-a1-m1-cA_2mgs-a1-m1-cB
19 2mgs-a1-m1-cA 71 64 0.4722 0.4789 0.5312 2.18e-22 2mgs-a1-m1-cA_2mgs-a1-m1-cB
20 1pfn-a1-m1-cD 68 66 0.4861 0.5147 0.5303 1.93e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cD
21 1pfn-a1-m1-cC 68 66 0.4861 0.5147 0.5303 1.93e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC
22 1pfn-a1-m1-cB 68 66 0.4861 0.5147 0.5303 1.93e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
23 4r9w-a1-m2-cB 64 64 0.4306 0.4844 0.4844 1.47e-17 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
24 4r9y-a1-m1-cD 65 64 0.4306 0.4769 0.4844 1.69e-17 4r9y-a1-m1-cB_4r9y-a1-m1-cD
25 4r9y-a1-m1-cB 65 64 0.4306 0.4769 0.4844 1.69e-17 4r9y-a1-m1-cB_4r9y-a1-m1-cD
26 1plf-a1-m1-cD 65 64 0.4306 0.4769 0.4844 1.10e-16 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
27 1plf-a1-m1-cB 65 64 0.4306 0.4769 0.4844 1.10e-16 1plf-a1-m1-cB_1plf-a1-m1-cD
28 1f9q-a1-m1-cC 62 62 0.4167 0.4839 0.4839 1.43e-16 1f9q-a1-m1-cB_1f9q-a1-m1-cC
29 1f9q-a1-m1-cB 62 62 0.4167 0.4839 0.4839 1.43e-16 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 4r9w-a1-m2-cA 62 62 0.4167 0.4839 0.4839 1.51e-16 4r9w-a1-m2-cA_4r9w-a1-m2-cB
31 4r9w-a1-m1-cA 62 62 0.4167 0.4839 0.4839 1.51e-16 4r9w-a1-m1-cA_4r9w-a1-m2-cB
32 1plf-a1-m1-cC 63 63 0.4306 0.4921 0.4921 2.90e-16 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
33 1plf-a1-m1-cA 63 63 0.4306 0.4921 0.4921 2.90e-16 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
34 1qe6-a3-m1-cD 72 65 0.4028 0.4028 0.4462 3.77e-15 1qe6-a3-m2-cB_1qe6-a3-m1-cD
35 1qe6-a3-m2-cB 71 65 0.4028 0.4085 0.4462 3.80e-15 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
36 4hsv-a1-m1-cD 65 64 0.4028 0.4462 0.4531 6.54e-15 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
37 4hsv-a1-m1-cA 65 64 0.4028 0.4462 0.4531 6.54e-15 4hsv-a1-m1-cA_4hsv-a1-m1-cD
38 1qe6-a3-m2-cA 68 61 0.3750 0.3971 0.4426 4.67e-14 1qe6-a3-m2-cA_1qe6-a3-m2-cB
39 4hsv-a1-m1-cC 59 58 0.3611 0.4407 0.4483 7.82e-13 4hsv-a1-m1-cC_4hsv-a1-m1-cD
40 1o7y-a1-m1-cA 67 60 0.2639 0.2836 0.3167 1.12e-05 1o7y-a1-m1-cC_1o7y-a1-m1-cA
41 1o7y-a1-m1-cC 63 60 0.2639 0.3016 0.3167 1.20e-05 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
42 1o7y-a1-m1-cD 62 59 0.2639 0.3065 0.3220 1.66e-05 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 58 0.2500 0.2903 0.3103 1.22e-04 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 2r3z-a1-m1-cA 68 64 0.2639 0.2794 0.2969 8.88e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
45 2r3z-a1-m1-cB 67 64 0.2639 0.2836 0.2969 0.001 2r3z-a1-m1-cB_2r3z-a1-m1-cA
46 2r3z-a1-m1-cD 64 63 0.2639 0.2969 0.3016 0.001 2r3z-a1-m1-cD_2r3z-a1-m1-cA
47 3hp3-a3-m1-cF 65 67 0.2639 0.2923 0.2836 0.013 3hp3-a3-m1-cD_3hp3-a3-m1-cF
48 4uai-a1-m1-cB 67 67 0.2639 0.2836 0.2836 0.014 4uai-a1-m1-cB_4uai-a1-m1-cA
49 4uai-a1-m1-cA 68 67 0.2639 0.2794 0.2836 0.014 4uai-a1-m1-cB_4uai-a1-m1-cA
50 3hp3-a3-m1-cD 64 62 0.2500 0.2812 0.2903 0.052 3hp3-a3-m1-cD_3hp3-a3-m1-cF
51 4mhe-a2-m1-cC 61 41 0.1806 0.2131 0.3171 0.21 4mhe-a2-m1-cC_4mhe-a2-m1-cB
52 4mhe-a2-m1-cB 69 41 0.1806 0.1884 0.3171 0.22 4mhe-a2-m1-cC_4mhe-a2-m1-cB
53 2fj2-a2-m1-cC 68 32 0.1389 0.1471 0.3125 1.5 2fj2-a2-m1-cD_2fj2-a2-m1-cC
54 2fj2-a2-m1-cD 67 32 0.1389 0.1493 0.3125 1.6 2fj2-a2-m1-cD_2fj2-a2-m1-cC
55 2q8r-a2-m1-cG 63 32 0.1250 0.1429 0.2812 2.3 2q8r-a2-m1-cF_2q8r-a2-m1-cG
56 2q8r-a2-m1-cF 63 32 0.1250 0.1429 0.2812 2.3 2q8r-a2-m1-cF_2q8r-a2-m1-cG
57 6eem-a1-m1-cB 487 52 0.1806 0.0267 0.2500 5.4 6eem-a1-m1-cA_6eem-a1-m1-cB
58 6eem-a1-m1-cA 487 52 0.1806 0.0267 0.2500 5.4 6eem-a1-m1-cA_6eem-a1-m1-cB
59 3hul-a1-m2-cA 277 27 0.1528 0.0397 0.4074 9.5 3hul-a1-m2-cB_3hul-a1-m2-cA
60 3hul-a1-m1-cA 277 27 0.1528 0.0397 0.4074 9.5 3hul-a1-m2-cB_3hul-a1-m1-cA
61 3hul-a1-m2-cB 269 27 0.1528 0.0409 0.4074 9.9 3hul-a1-m1-cB_3hul-a1-m2-cB, 3hul-a1-m2-cB_3hul-a1-m1-cA, 3hul-a1-m2-cB_3hul-a1-m2-cA
62 3hul-a1-m1-cB 269 27 0.1528 0.0409 0.4074 9.9 3hul-a1-m1-cB_3hul-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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