Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=85)
ASYRDKKVMSIGIVKELTGLSERQIRYYEKRSLLFPDRTNTGIRKYSFSDVERLMDIADR
IEEGVQTSEIRTELAKKDEARKMKE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4r24-a1-m2-cB 85 85 1.0000 1.0000 1.0000 8.06e-57 4r24-a1-m1-cB_4r24-a1-m2-cB
2 4r24-a1-m1-cB 85 85 1.0000 1.0000 1.0000 8.06e-57 4r24-a1-m1-cB_4r24-a1-m2-cB
3 4r4e-a1-m1-cB 84 75 0.4235 0.4286 0.4800 8.72e-19 4r4e-a1-m1-cA_4r4e-a1-m1-cB
4 4r4e-a1-m1-cA 83 75 0.4235 0.4337 0.4800 9.68e-19 4r4e-a1-m1-cA_4r4e-a1-m1-cB
5 7tea-a2-m1-cC 76 68 0.3412 0.3816 0.4265 1.05e-13 7tea-a2-m1-cA_7tea-a2-m1-cC
6 7tea-a2-m1-cA 76 68 0.3412 0.3816 0.4265 1.08e-13 7tea-a2-m1-cA_7tea-a2-m1-cC
7 7tec-a1-m2-cA 72 67 0.3059 0.3611 0.3881 6.73e-12 7tec-a1-m1-cA_7tec-a1-m2-cA
8 7tec-a1-m1-cA 72 67 0.3059 0.3611 0.3881 6.73e-12 7tec-a1-m1-cA_7tec-a1-m2-cA
9 2vz4-a1-m2-cA 100 77 0.2824 0.2400 0.3117 4.15e-06 2vz4-a1-m1-cA_2vz4-a1-m2-cA
10 2vz4-a1-m1-cA 100 77 0.2824 0.2400 0.3117 4.15e-06 2vz4-a1-m1-cA_2vz4-a1-m2-cA
11 1r8d-a1-m1-cB 107 70 0.3059 0.2430 0.3714 5.95e-05 1r8d-a1-m1-cB_1r8d-a1-m1-cA
12 1r8d-a1-m1-cA 109 70 0.3059 0.2385 0.3714 6.14e-05 1r8d-a1-m1-cB_1r8d-a1-m1-cA
13 4wls-a1-m1-cB 108 45 0.1882 0.1481 0.3556 1.42e-04 4wls-a1-m1-cA_4wls-a1-m1-cB
14 4wls-a1-m1-cA 108 45 0.1882 0.1481 0.3556 1.42e-04 4wls-a1-m1-cA_4wls-a1-m1-cB
15 3gp4-a2-m3-cB 130 86 0.3294 0.2154 0.3256 1.59e-04 3gp4-a2-m2-cB_3gp4-a2-m3-cB, 3gp4-a2-m3-cB_3gp4-a2-m3-cA
16 3gp4-a2-m2-cB 130 86 0.3294 0.2154 0.3256 1.59e-04 3gp4-a2-m2-cB_3gp4-a2-m3-cB
17 3gp4-a2-m3-cA 132 86 0.3294 0.2121 0.3256 1.65e-04 3gp4-a2-m3-cB_3gp4-a2-m3-cA
18 3qao-a1-m2-cA 136 45 0.2235 0.1397 0.4222 0.001 3qao-a1-m1-cA_3qao-a1-m2-cA
19 3qao-a1-m1-cA 136 45 0.2235 0.1397 0.4222 0.001 3qao-a1-m1-cA_3qao-a1-m2-cA
20 1q06-a1-m1-cB 126 47 0.2000 0.1349 0.3617 0.001 1q06-a1-m1-cA_1q06-a1-m1-cB
21 1q06-a1-m1-cA 122 47 0.2000 0.1393 0.3617 0.001 1q06-a1-m1-cA_1q06-a1-m1-cB
22 6jgw-a1-m1-cB 116 71 0.2941 0.2155 0.3521 0.005 6jgw-a1-m1-cB_6jgw-a1-m1-cA
23 6jni-a2-m1-cC 128 71 0.2941 0.1953 0.3521 0.006 6jni-a2-m1-cC_6jni-a2-m1-cD
24 6jgw-a1-m1-cA 125 71 0.2941 0.2000 0.3521 0.006 6jgw-a1-m1-cB_6jgw-a1-m1-cA
25 6jni-a2-m1-cD 145 71 0.2941 0.1724 0.3521 0.008 6jni-a2-m1-cC_6jni-a2-m1-cD
26 3hh0-a1-m1-cB 128 57 0.2353 0.1562 0.3509 0.13 3hh0-a1-m1-cD_3hh0-a1-m1-cB
27 3hh0-a1-m1-cA 131 57 0.2353 0.1527 0.3509 0.14 3hh0-a1-m1-cD_3hh0-a1-m1-cA
28 3hh0-a1-m1-cD 127 57 0.2353 0.1575 0.3509 0.14 3hh0-a1-m1-cC_3hh0-a1-m1-cD, 3hh0-a1-m1-cD_3hh0-a1-m1-cA, 3hh0-a1-m1-cD_3hh0-a1-m1-cB
29 3hh0-a1-m1-cC 127 57 0.2353 0.1575 0.3509 0.14 3hh0-a1-m1-cC_3hh0-a1-m1-cD
30 5crl-a1-m1-cB 119 46 0.1529 0.1092 0.2826 0.29 5crl-a1-m1-cA_5crl-a1-m1-cB
31 5crl-a1-m1-cA 114 46 0.1529 0.1140 0.2826 0.34 5crl-a1-m1-cA_5crl-a1-m1-cB
32 6xlk-a1-m1-cH 268 64 0.2118 0.0672 0.2812 1.6 6xlk-a1-m1-cG_6xlk-a1-m1-cH
33 6xlk-a1-m1-cG 268 64 0.2118 0.0672 0.2812 1.6 6xlk-a1-m1-cG_6xlk-a1-m1-cH
34 6jgf-a1-m2-cA 115 52 0.2000 0.1478 0.3269 3.7 6jgf-a1-m1-cA_6jgf-a1-m2-cA
35 6jgf-a1-m1-cA 115 52 0.2000 0.1478 0.3269 3.7 6jgf-a1-m1-cA_6jgf-a1-m2-cA
36 3q2y-a1-m2-cA 276 47 0.2000 0.0616 0.3617 4.9 3q2y-a1-m1-cA_3q2y-a1-m2-cA
37 3q2y-a1-m1-cA 276 47 0.2000 0.0616 0.3617 4.9 3q2y-a1-m1-cA_3q2y-a1-m2-cA
38 1j31-a1-m1-cB 255 45 0.1765 0.0588 0.3333 7.1 1j31-a1-m1-cA_1j31-a1-m1-cB
39 1j31-a1-m1-cA 255 45 0.1765 0.0588 0.3333 7.1 1j31-a1-m1-cA_1j31-a1-m1-cB
40 7d73-a1-m1-cD 406 40 0.1529 0.0320 0.3250 8.6 7d73-a1-m1-cC_7d73-a1-m1-cD, 7d73-a1-m1-cD_7d73-a1-m1-cA
41 7d73-a1-m1-cC 406 40 0.1529 0.0320 0.3250 8.6 7d73-a1-m1-cC_7d73-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600