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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
ATETATRDQLTKEAFQNPDNQKVNIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQA
IEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zwk-a2-m5-cF 63 63 1.0000 1.0000 1.0000 2.30e-39 2zwk-a2-m1-cD_2zwk-a2-m5-cF
2 2zwk-a2-m1-cD 63 63 1.0000 1.0000 1.0000 2.30e-39 2zwk-a2-m1-cD_2zwk-a2-m5-cF
3 2zwk-a1-m4-cB 63 63 1.0000 1.0000 1.0000 2.30e-39 2zwk-a1-m2-cB_2zwk-a1-m4-cB
4 2zwk-a1-m2-cB 63 63 1.0000 1.0000 1.0000 2.30e-39 2zwk-a1-m2-cB_2zwk-a1-m4-cB
5 3s46-a1-m1-cB 365 40 0.2698 0.0466 0.4250 0.78 3s46-a1-m1-cA_3s46-a1-m1-cB
6 3s46-a1-m1-cA 365 40 0.2698 0.0466 0.4250 0.78 3s46-a1-m1-cA_3s46-a1-m1-cB
7 2acv-a1-m1-cB 456 35 0.1905 0.0263 0.3429 4.6 2acv-a1-m1-cB_2acv-a1-m1-cA
8 2acv-a1-m1-cA 461 35 0.1905 0.0260 0.3429 4.8 2acv-a1-m1-cB_2acv-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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