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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
ATFQTDADFLLVGDDTSRYEEVMKTFDTVEAVRKSDLDDRVYMVCLKQGSTFVLNGGIEE
LRLLTGDSTLEIQPMIVPT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gj2-a5-m5-cB 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a5-m1-cD_2gj2-a5-m5-cB
2 2gj2-a5-m1-cD 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a5-m1-cD_2gj2-a5-m5-cB
3 2gj2-a3-m3-cD 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a3-m1-cA_2gj2-a3-m3-cD
4 2gj2-a3-m1-cA 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a3-m1-cA_2gj2-a3-m3-cD
5 2gj2-a2-m1-cC 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a2-m1-cB_2gj2-a2-m1-cC
6 2gj2-a2-m1-cB 79 79 1.0000 1.0000 1.0000 2.55e-53 2gj2-a2-m1-cB_2gj2-a2-m1-cC
7 2zug-a1-m1-cA 77 79 0.9620 0.9870 0.9620 3.72e-45 2zug-a1-m1-cB_2zug-a1-m1-cA
8 2zug-a1-m1-cB 76 79 0.9620 1.0000 0.9620 4.45e-45 2zug-a1-m1-cB_2zug-a1-m1-cA
9 5lr8-a2-m3-cB 843 72 0.2658 0.0249 0.2917 3.1 5lr8-a2-m1-cB_5lr8-a2-m3-cB
10 5lr8-a2-m1-cB 843 72 0.2658 0.0249 0.2917 3.1 5lr8-a2-m1-cB_5lr8-a2-m3-cB
11 3wbm-a1-m1-cC 86 37 0.1646 0.1512 0.3514 4.2 3wbm-a1-m1-cA_3wbm-a1-m1-cC
12 3wbm-a1-m1-cA 86 37 0.1646 0.1512 0.3514 4.2 3wbm-a1-m1-cA_3wbm-a1-m1-cC
13 2bky-a1-m1-cB 89 37 0.1646 0.1461 0.3514 5.6 2bky-a1-m1-cA_2bky-a1-m1-cB
14 2bky-a1-m1-cA 89 37 0.1646 0.1461 0.3514 5.6 2bky-a1-m1-cA_2bky-a1-m1-cB
15 1h0x-a1-m1-cB 89 37 0.1646 0.1461 0.3514 5.6 1h0x-a1-m1-cA_1h0x-a1-m1-cB
16 1h0x-a1-m1-cA 89 37 0.1646 0.1461 0.3514 5.6 1h0x-a1-m1-cA_1h0x-a1-m1-cB
17 6pnl-a1-m2-cA 334 49 0.1519 0.0359 0.2449 9.9 6pnl-a1-m1-cA_6pnl-a1-m2-cA
18 6pnl-a1-m1-cA 334 49 0.1519 0.0359 0.2449 9.9 6pnl-a1-m1-cA_6pnl-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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