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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
ATKAQLIAEVSRRTGMNVEYSQMLTGAANWNLELALQSFEQQKANVPPEAFISQPQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4wp2-a1-m1-cG 60 57 1.0000 0.9500 1.0000 1.04e-36 4wp2-a1-m1-cF_4wp2-a1-m1-cG
2 4wp2-a1-m1-cA 60 57 1.0000 0.9500 1.0000 1.04e-36 4wp2-a1-m1-cB_4wp2-a1-m1-cA
3 4wp2-a1-m1-cB 57 57 1.0000 1.0000 1.0000 1.06e-36 4wp2-a1-m1-cB_4wp2-a1-m1-cA
4 4wp2-a1-m1-cF 55 55 0.9649 1.0000 1.0000 2.32e-35 4wp2-a1-m1-cF_4wp2-a1-m1-cG
5 6opf-a1-m1-cB 84 40 0.2281 0.1548 0.3250 1.6 6opf-a1-m1-cB_6opf-a1-m1-cA
6 6opf-a1-m1-cA 85 40 0.2281 0.1529 0.3250 1.9 6opf-a1-m1-cB_6opf-a1-m1-cA
7 5swi-a2-m1-cD 681 44 0.2456 0.0206 0.3182 4.9 5swi-a2-m1-cD_5swi-a2-m1-cA
8 5swi-a3-m1-cA 692 44 0.2456 0.0202 0.3182 5.0 5swi-a3-m1-cC_5swi-a3-m1-cA
9 5swi-a2-m1-cA 692 44 0.2456 0.0202 0.3182 5.0 5swi-a2-m1-cD_5swi-a2-m1-cA
10 5swi-a3-m1-cC 680 44 0.2456 0.0206 0.3182 5.3 5swi-a3-m1-cC_5swi-a3-m1-cA
11 3agp-a2-m2-cA 1202 41 0.2105 0.0100 0.2927 5.5 3agp-a2-m1-cA_3agp-a2-m2-cA
12 3agp-a2-m1-cA 1202 41 0.2105 0.0100 0.2927 5.5 3agp-a2-m1-cA_3agp-a2-m2-cA
13 5g5z-a3-m3-cD 491 35 0.2105 0.0244 0.3429 6.2 5g5z-a3-m1-cA_5g5z-a3-m3-cD
14 5g5z-a3-m1-cA 491 35 0.2105 0.0244 0.3429 6.2 5g5z-a3-m1-cA_5g5z-a3-m3-cD

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Reference:
Jacob Schwartz et al.

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