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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
ATPGELTLLYNGCLKFIRLAAQAIENDDERKNENLIKAQNIIQELNFTLNRNIELSASGA
YDYYRRLVQANIKNDTGLAEVEGYVTDFRDAWKQAI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vh6-a1-m1-cB 102 96 1.0000 0.9412 1.0000 6.31e-67 1vh6-a1-m1-cA_1vh6-a1-m1-cB
2 1vh6-a1-m1-cA 96 96 1.0000 1.0000 1.0000 1.07e-66 1vh6-a1-m1-cA_1vh6-a1-m1-cB
3 3iqc-a3-m1-cA 119 83 0.2604 0.2101 0.3012 0.011 3iqc-a3-m1-cB_3iqc-a3-m1-cA
4 3iqc-a3-m1-cB 101 100 0.2917 0.2772 0.2800 0.014 3iqc-a3-m1-cB_3iqc-a3-m1-cA
5 6awl-a1-m1-cA 217 31 0.1250 0.0553 0.3871 3.1 6awl-a1-m1-cB_6awl-a1-m1-cA
6 6awl-a1-m1-cB 191 31 0.1250 0.0628 0.3871 3.3 6awl-a1-m1-cB_6awl-a1-m1-cA
7 3imh-a2-m7-cB 332 38 0.1562 0.0452 0.3947 5.5 3imh-a2-m5-cB_3imh-a2-m7-cB
8 3imh-a2-m5-cB 332 38 0.1562 0.0452 0.3947 5.5 3imh-a2-m5-cB_3imh-a2-m7-cB
9 3qde-a1-m1-cB 811 26 0.1042 0.0123 0.3846 6.7 3qde-a1-m1-cA_3qde-a1-m1-cB
10 3qde-a1-m1-cA 811 26 0.1042 0.0123 0.3846 6.7 3qde-a1-m1-cA_3qde-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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