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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
ATRARAASNLLKALAHEGRLMIMCYLASGEKSVTELETRLSTRQAAVSQQLARLRLEGLV
QSRREGKTIYYSLSDPRAARVVQTVYEQFCSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6o8l-a1-m2-cA 92 92 1.0000 1.0000 1.0000 3.12e-62 6o8l-a1-m1-cA_6o8l-a1-m2-cA
2 6o8l-a1-m1-cA 92 92 1.0000 1.0000 1.0000 3.12e-62 6o8l-a1-m1-cA_6o8l-a1-m2-cA
3 3pqk-a3-m1-cF 99 89 0.4348 0.4040 0.4494 3.84e-20 3pqk-a3-m1-cF_3pqk-a3-m1-cE
4 3pqk-a3-m1-cE 100 89 0.4348 0.4000 0.4494 4.45e-20 3pqk-a3-m1-cF_3pqk-a3-m1-cE
5 4ooi-a1-m1-cB 96 81 0.3913 0.3750 0.4444 2.56e-19 4ooi-a1-m1-cA_4ooi-a1-m1-cB
6 4ooi-a1-m1-cA 95 81 0.3913 0.3789 0.4444 3.03e-19 4ooi-a1-m1-cA_4ooi-a1-m1-cB
7 3jth-a1-m1-cA 92 79 0.3913 0.3913 0.4557 8.76e-13 3jth-a1-m1-cB_3jth-a1-m1-cA
8 3jth-a1-m1-cB 88 79 0.3913 0.4091 0.4557 8.87e-13 3jth-a1-m1-cB_3jth-a1-m1-cA
9 4omz-a2-m1-cC 100 86 0.3261 0.3000 0.3488 7.77e-12 4omz-a2-m1-cD_4omz-a2-m1-cC
10 4omz-a2-m1-cD 98 86 0.3261 0.3061 0.3488 8.01e-12 4omz-a2-m1-cD_4omz-a2-m1-cC
11 3cuo-a2-m1-cD 94 84 0.3804 0.3723 0.4167 2.77e-11 3cuo-a2-m1-cD_3cuo-a2-m1-cC
12 3cuo-a2-m1-cC 95 88 0.3804 0.3684 0.3977 2.93e-11 3cuo-a2-m1-cD_3cuo-a2-m1-cC
13 2lkp-a1-m1-cB 119 78 0.3587 0.2773 0.4231 8.47e-11 2lkp-a1-m1-cA_2lkp-a1-m1-cB
14 2lkp-a1-m1-cA 119 78 0.3587 0.2773 0.4231 8.47e-11 2lkp-a1-m1-cA_2lkp-a1-m1-cB
15 2kjb-a1-m1-cB 95 74 0.2826 0.2737 0.3514 1.32e-08 2kjb-a1-m1-cA_2kjb-a1-m1-cB
16 2kjb-a1-m1-cA 95 74 0.2826 0.2737 0.3514 1.32e-08 2kjb-a1-m1-cA_2kjb-a1-m1-cB
17 1r1v-a3-m2-cA 95 74 0.2826 0.2737 0.3514 1.32e-08 1r1v-a3-m2-cA_1r1v-a3-m2-cB
18 1r1v-a3-m2-cB 96 74 0.2826 0.2708 0.3514 1.34e-08 1r1v-a3-m2-cA_1r1v-a3-m2-cB
19 6cdb-a3-m4-cB 95 74 0.2826 0.2737 0.3514 1.63e-08 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
20 6cdb-a3-m2-cB 95 74 0.2826 0.2737 0.3514 1.63e-08 6cdb-a3-m2-cB_6cdb-a3-m4-cB
21 6cdb-a3-m3-cA 97 74 0.2826 0.2680 0.3514 1.89e-08 6cdb-a3-m4-cB_6cdb-a3-m3-cA
22 6jmi-a1-m1-cA 100 76 0.2826 0.2600 0.3421 9.95e-08 6jmi-a1-m1-cD_6jmi-a1-m1-cA
23 3f6v-a1-m2-cA 96 80 0.2717 0.2604 0.3125 2.60e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
24 3f6v-a1-m1-cA 96 80 0.2717 0.2604 0.3125 2.60e-06 3f6v-a1-m1-cA_3f6v-a1-m2-cA
25 6uvu-a1-m1-cA 111 75 0.2935 0.2432 0.3600 2.73e-06 6uvu-a1-m1-cA_6uvu-a1-m1-cB
26 3gw2-a1-m2-cA 92 80 0.3370 0.3370 0.3875 2.86e-06 3gw2-a1-m1-cA_3gw2-a1-m2-cA
27 3gw2-a1-m1-cA 92 80 0.3370 0.3370 0.3875 2.86e-06 3gw2-a1-m1-cA_3gw2-a1-m2-cA
28 6uvu-a1-m1-cB 114 75 0.2935 0.2368 0.3600 3.12e-06 6uvu-a1-m1-cA_6uvu-a1-m1-cB
29 7p6f-a3-m3-cDDD 97 81 0.2717 0.2577 0.3086 2.44e-05 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
30 7p6f-a3-m1-cDDD 97 81 0.2717 0.2577 0.3086 2.44e-05 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
31 2oqg-a1-m1-cD 105 64 0.2283 0.2000 0.3281 3.35e-04 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
32 2oqg-a1-m1-cC 105 64 0.2283 0.2000 0.3281 3.35e-04 2oqg-a1-m1-cC_2oqg-a1-m1-cD
33 2oqg-a1-m1-cB 107 64 0.2283 0.1963 0.3281 3.60e-04 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
34 2oqg-a1-m1-cA 107 64 0.2283 0.1963 0.3281 3.64e-04 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
35 2jsc-a1-m1-cB 97 75 0.2826 0.2680 0.3467 8.15e-04 2jsc-a1-m1-cA_2jsc-a1-m1-cB
36 2jsc-a1-m1-cA 96 69 0.2609 0.2500 0.3478 0.001 2jsc-a1-m1-cA_2jsc-a1-m1-cB
37 1r23-a1-m1-cB 97 60 0.2065 0.1959 0.3167 0.003 1r23-a1-m1-cB_1r23-a1-m1-cA
38 1r23-a1-m1-cA 104 60 0.2065 0.1827 0.3167 0.003 1r23-a1-m1-cB_1r23-a1-m1-cA
39 3tgn-a1-m1-cB 146 57 0.1957 0.1233 0.3158 0.013 3tgn-a1-m1-cA_3tgn-a1-m1-cB
40 6jmi-a1-m1-cD 83 72 0.2609 0.2892 0.3333 0.017 6jmi-a1-m1-cD_6jmi-a1-m1-cA
41 2zkz-a1-m1-cB 82 53 0.1957 0.2195 0.3396 0.024 2zkz-a1-m1-cA_2zkz-a1-m1-cB
42 2zkz-a1-m1-cA 82 53 0.1957 0.2195 0.3396 0.024 2zkz-a1-m1-cA_2zkz-a1-m1-cB
43 2hzt-a2-m1-cD 88 58 0.1739 0.1818 0.2759 0.34 2hzt-a2-m1-cC_2hzt-a2-m1-cD
44 2hzt-a2-m1-cC 88 58 0.1739 0.1818 0.2759 0.34 2hzt-a2-m1-cC_2hzt-a2-m1-cD
45 6j05-a1-m1-cA 101 85 0.2717 0.2475 0.2941 0.41 6j05-a1-m1-cB_6j05-a1-m1-cA
46 2pfb-a1-m1-cB 123 58 0.2174 0.1626 0.3448 0.94 2pfb-a1-m1-cB_2pfb-a1-m1-cA
47 3l09-a3-m1-cC 250 25 0.1304 0.0480 0.4800 1.1 3l09-a3-m1-cD_3l09-a3-m1-cC
48 3l09-a2-m1-cB 248 25 0.1304 0.0484 0.4800 1.1 3l09-a2-m1-cB_3l09-a2-m1-cD
49 2p4w-a1-m1-cB 198 58 0.2283 0.1061 0.3621 1.1 2p4w-a1-m1-cA_2p4w-a1-m1-cB
50 2p4w-a1-m1-cA 197 58 0.2283 0.1066 0.3621 1.1 2p4w-a1-m1-cA_2p4w-a1-m1-cB
51 3l09-a3-m1-cD 248 25 0.1304 0.0484 0.4800 1.2 3l09-a3-m1-cD_3l09-a3-m1-cC
52 3l09-a2-m1-cD 248 25 0.1304 0.0484 0.4800 1.2 3l09-a2-m1-cB_3l09-a2-m1-cD
53 2pex-a1-m1-cA 136 57 0.2174 0.1471 0.3509 1.8 2pex-a1-m1-cA_2pex-a1-m1-cB
54 2pfb-a1-m1-cA 129 57 0.2174 0.1550 0.3509 1.9 2pfb-a1-m1-cB_2pfb-a1-m1-cA
55 2pex-a1-m1-cB 137 57 0.2174 0.1460 0.3509 1.9 2pex-a1-m1-cA_2pex-a1-m1-cB
56 5d0n-a1-m2-cA 274 51 0.1739 0.0584 0.3137 1.9 5d0n-a1-m1-cA_5d0n-a1-m2-cA
57 5d0n-a1-m1-cA 274 51 0.1739 0.0584 0.3137 1.9 5d0n-a1-m1-cA_5d0n-a1-m2-cA
58 4b8x-a1-m1-cA 139 50 0.1522 0.1007 0.2800 2.6 4b8x-a1-m1-cB_4b8x-a1-m1-cA
59 3tgn-a1-m1-cA 135 54 0.1739 0.1185 0.2963 3.4 3tgn-a1-m1-cA_3tgn-a1-m1-cB
60 4b8x-a1-m1-cB 138 44 0.1413 0.0942 0.2955 5.4 4b8x-a1-m1-cB_4b8x-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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