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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
ATSTETIHYVNEDGDQVFEDGGGKLDFTRTVTIDDVTNEVVEYGEWTPVTDDEFAAVTSP
DKDGYTPDTSEVAAQKPDTDGPDGTVKDVEVTVTYTANP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lyy-a1-m2-cB 99 99 1.0000 1.0000 1.0000 1.85e-65 3lyy-a1-m2-cB_3lyy-a1-m1-cA
2 3lyy-a1-m1-cA 101 99 1.0000 0.9802 1.0000 1.95e-65 3lyy-a1-m2-cB_3lyy-a1-m1-cA
3 7vf4-a4-m1-cG 219 64 0.1818 0.0822 0.2812 0.037 7vf4-a4-m1-cH_7vf4-a4-m1-cG
4 7vf4-a4-m1-cH 214 64 0.1818 0.0841 0.2812 0.038 7vf4-a4-m1-cH_7vf4-a4-m1-cG
5 6xj9-a1-m1-cB 681 64 0.1919 0.0279 0.2969 1.5 6xj9-a1-m1-cB_6xj9-a1-m1-cA
6 6xj9-a1-m1-cA 706 64 0.1919 0.0269 0.2969 1.5 6xj9-a1-m1-cB_6xj9-a1-m1-cA
7 4ijz-a1-m1-cA 274 35 0.1313 0.0474 0.3714 2.9 4ijz-a1-m1-cA_4ijz-a1-m1-cB
8 4ijz-a1-m1-cB 275 35 0.1313 0.0473 0.3714 2.9 4ijz-a1-m1-cA_4ijz-a1-m1-cB
9 6inx-a1-m2-cA 339 24 0.1111 0.0324 0.4583 4.0 6inx-a1-m1-cA_6inx-a1-m2-cA
10 6inx-a1-m1-cA 339 24 0.1111 0.0324 0.4583 4.0 6inx-a1-m1-cA_6inx-a1-m2-cA
11 1r1a-a1-m9-c2 253 43 0.1717 0.0672 0.3953 4.5 1r1a-a1-m23-c2_1r1a-a1-m9-c2
12 1r1a-a1-m23-c2 253 43 0.1717 0.0672 0.3953 4.5 1r1a-a1-m23-c2_1r1a-a1-m9-c2
13 1fpn-a1-m9-c2 250 43 0.1515 0.0600 0.3488 6.5 1fpn-a1-m23-c2_1fpn-a1-m9-c2
14 1fpn-a1-m23-c2 250 43 0.1515 0.0600 0.3488 6.5 1fpn-a1-m23-c2_1fpn-a1-m9-c2
15 1z7s-a1-m9-c2 267 43 0.1616 0.0599 0.3721 7.4 1z7s-a1-m23-c2_1z7s-a1-m9-c2
16 1z7s-a1-m23-c2 267 43 0.1616 0.0599 0.3721 7.4 1z7s-a1-m23-c2_1z7s-a1-m9-c2

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Reference:
Jacob Schwartz et al.

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