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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
ATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFSKQF
LH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1t3j-a1-m2-cA 62 62 1.0000 1.0000 1.0000 1.51e-39 1t3j-a1-m1-cA_1t3j-a1-m2-cA
2 1t3j-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.51e-39 1t3j-a1-m1-cA_1t3j-a1-m2-cA
3 5gom-a1-m1-cA 407 39 0.5645 0.0860 0.8974 1.45e-16 5gom-a1-m1-cB_5gom-a1-m1-cA
4 5gom-a1-m1-cB 404 39 0.5645 0.0866 0.8974 1.59e-16 5gom-a1-m1-cB_5gom-a1-m1-cA
5 5yew-a2-m2-cC 389 37 0.5323 0.0848 0.8919 4.29e-15 5yew-a2-m1-cC_5yew-a2-m2-cC
6 5yew-a2-m1-cC 389 37 0.5323 0.0848 0.8919 4.29e-15 5yew-a2-m1-cC_5yew-a2-m2-cC
7 1gmj-a2-m1-cC 59 30 0.2097 0.2203 0.4333 2.0 1gmj-a2-m1-cD_1gmj-a2-m1-cC
8 1gmj-a1-m1-cB 60 30 0.2097 0.2167 0.4333 2.3 1gmj-a1-m1-cB_1gmj-a1-m1-cA
9 1gmj-a2-m1-cD 56 30 0.2097 0.2321 0.4333 2.7 1gmj-a2-m1-cD_1gmj-a2-m1-cC
10 1gmj-a1-m1-cA 65 30 0.2097 0.2000 0.4333 3.0 1gmj-a1-m1-cB_1gmj-a1-m1-cA
11 2d3e-a1-m1-cD 130 41 0.2581 0.1231 0.3902 3.3 2d3e-a1-m1-cA_2d3e-a1-m1-cD, 2d3e-a1-m1-cB_2d3e-a1-m1-cD
12 2d3e-a1-m1-cC 130 41 0.2581 0.1231 0.3902 3.3 2d3e-a1-m1-cA_2d3e-a1-m1-cC
13 2d3e-a1-m1-cB 130 41 0.2581 0.1231 0.3902 3.3 2d3e-a1-m1-cA_2d3e-a1-m1-cB, 2d3e-a1-m1-cB_2d3e-a1-m1-cD
14 2d3e-a1-m1-cA 130 41 0.2581 0.1231 0.3902 3.3 2d3e-a1-m1-cA_2d3e-a1-m1-cB, 2d3e-a1-m1-cA_2d3e-a1-m1-cC, 2d3e-a1-m1-cA_2d3e-a1-m1-cD
15 7usy-a1-m1-cB 602 43 0.1613 0.0166 0.2326 3.4 7usy-a1-m1-cA_7usy-a1-m1-cB
16 7usy-a1-m1-cA 602 43 0.1613 0.0166 0.2326 3.4 7usy-a1-m1-cA_7usy-a1-m1-cB
17 2x0j-a1-m2-cA 294 29 0.1452 0.0306 0.3103 3.9 2x0j-a1-m2-cA_2x0j-a1-m1-cA
18 2x0j-a1-m1-cA 294 29 0.1452 0.0306 0.3103 3.9 2x0j-a1-m2-cA_2x0j-a1-m1-cA
19 7say-a2-m1-cC 53 46 0.2903 0.3396 0.3913 4.6 7say-a2-m1-cC_7say-a2-m1-cD
20 2qne-a1-m1-cB 456 32 0.1774 0.0241 0.3438 5.5 2qne-a1-m1-cB_2qne-a1-m1-cA
21 2qne-a1-m1-cA 457 32 0.1774 0.0241 0.3438 5.9 2qne-a1-m1-cB_2qne-a1-m1-cA
22 7say-a2-m1-cD 67 18 0.1774 0.1642 0.6111 7.5 7say-a2-m1-cC_7say-a2-m1-cD
23 6j5k-a1-m1-cCJ 75 30 0.2097 0.1733 0.4333 7.7 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
24 6j5k-a1-m1-cJ 78 30 0.2097 0.1667 0.4333 8.2 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
25 7sgy-a1-m1-cB 386 32 0.1613 0.0259 0.3125 8.7 7sgy-a1-m1-cA_7sgy-a1-m1-cB
26 1x0x-a2-m2-cA 350 49 0.2581 0.0457 0.3265 9.6 1x0x-a2-m1-cA_1x0x-a2-m2-cA
27 1x0x-a2-m1-cA 350 49 0.2581 0.0457 0.3265 9.6 1x0x-a2-m1-cA_1x0x-a2-m2-cA
28 7sgy-a1-m1-cA 382 32 0.1613 0.0262 0.3125 9.7 7sgy-a1-m1-cA_7sgy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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