Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
ATTPIIHLKGDANILKCLRYRLSKYKQLYEQVSSTWHWTCTDGKHKNAIVTLTYISTSQR
DDFLNTVVIPNTVSVSTGYMTI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1a7g-a1-m2-cE 82 82 1.0000 1.0000 1.0000 2.61e-57 1a7g-a1-m1-cE_1a7g-a1-m2-cE
2 1a7g-a1-m1-cE 82 82 1.0000 1.0000 1.0000 2.61e-57 1a7g-a1-m1-cE_1a7g-a1-m2-cE
3 2q79-a1-m2-cA 74 80 0.6341 0.7027 0.6500 1.11e-30 2q79-a1-m1-cA_2q79-a1-m2-cA
4 2q79-a1-m1-cA 74 80 0.6341 0.7027 0.6500 1.11e-30 2q79-a1-m1-cA_2q79-a1-m2-cA
5 1f9f-a2-m1-cD 82 80 0.5854 0.5854 0.6000 2.22e-29 1f9f-a2-m1-cC_1f9f-a2-m1-cD
6 1f9f-a2-m1-cC 76 80 0.5610 0.6053 0.5750 4.93e-27 1f9f-a2-m1-cC_1f9f-a2-m1-cD
7 1r8h-a7-m1-cD 87 83 0.4878 0.4598 0.4819 1.32e-26 1r8h-a7-m1-cC_1r8h-a7-m1-cD
8 1r8h-a4-m1-cE 87 83 0.4878 0.4598 0.4819 1.32e-26 1r8h-a4-m1-cB_1r8h-a4-m1-cE
9 1r8h-a4-m1-cB 87 83 0.4878 0.4598 0.4819 1.32e-26 1r8h-a4-m1-cB_1r8h-a4-m1-cE
10 1r8h-a7-m1-cC 83 83 0.4756 0.4699 0.4699 3.74e-23 1r8h-a7-m1-cC_1r8h-a7-m1-cD
11 6bus-a1-m1-c2 92 72 0.3049 0.2717 0.3472 1.38e-09 6bus-a1-m1-c1_6bus-a1-m1-c2
12 6bus-a1-m1-c1 92 72 0.3049 0.2717 0.3472 1.38e-09 6bus-a1-m1-c1_6bus-a1-m1-c2
13 1jjh-a3-m3-cC 73 70 0.2927 0.3288 0.3429 8.64e-08 1jjh-a3-m1-cC_1jjh-a3-m3-cC
14 1jjh-a3-m1-cC 73 70 0.2927 0.3288 0.3429 8.64e-08 1jjh-a3-m1-cC_1jjh-a3-m3-cC
15 1jjh-a2-m3-cB 78 70 0.2927 0.3077 0.3429 9.96e-08 1jjh-a2-m1-cB_1jjh-a2-m3-cB
16 1jjh-a2-m1-cB 78 70 0.2927 0.3077 0.3429 9.96e-08 1jjh-a2-m1-cB_1jjh-a2-m3-cB
17 1jjh-a1-m2-cA 77 70 0.2927 0.3117 0.3429 1.18e-07 1jjh-a1-m1-cA_1jjh-a1-m2-cA
18 1jjh-a1-m1-cA 77 70 0.2927 0.3117 0.3429 1.18e-07 1jjh-a1-m1-cA_1jjh-a1-m2-cA
19 4d8j-a4-m5-cB 148 58 0.1829 0.1014 0.2586 2.1 4d8j-a4-m5-cB_4d8j-a4-m1-cL
20 4d8j-a3-m4-cC 148 58 0.1829 0.1014 0.2586 2.1 4d8j-a3-m4-cC_4d8j-a3-m4-cD
21 4d8j-a3-m1-cH 148 58 0.1829 0.1014 0.2586 2.1 4d8j-a3-m1-cH_4d8j-a3-m4-cD
22 4d8j-a4-m1-cL 149 58 0.1829 0.1007 0.2586 2.2 4d8j-a4-m5-cB_4d8j-a4-m1-cL
23 4d8j-a3-m4-cD 149 58 0.1829 0.1007 0.2586 2.2 4d8j-a3-m1-cH_4d8j-a3-m4-cD, 4d8j-a3-m4-cC_4d8j-a3-m4-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600