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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
ATTYEEFAAKLDRLDAEFAKKEEQNKRFFADKPDEATLSPEKEHYEKFEKIQEHTDKFNK
KREHSEHFKAKFAELLEQQKN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f0k-a1-m1-cA 81 81 1.0000 1.0000 1.0000 1.36e-51 7f0k-a1-m1-cB_7f0k-a1-m1-cA
2 7f0k-a1-m1-cB 73 73 0.9012 1.0000 1.0000 1.36e-45 7f0k-a1-m1-cB_7f0k-a1-m1-cA
3 1p0k-a1-m4-cA 306 35 0.1728 0.0458 0.4000 1.4 1p0k-a1-m4-cA_1p0k-a1-m4-cB
4 1p0k-a3-m4-cB 309 35 0.1728 0.0453 0.4000 1.4 1p0k-a3-m2-cB_1p0k-a3-m4-cB
5 1p0k-a3-m2-cB 309 35 0.1728 0.0453 0.4000 1.4 1p0k-a3-m2-cB_1p0k-a3-m4-cB
6 1p0k-a1-m4-cB 309 35 0.1728 0.0453 0.4000 1.4 1p0k-a1-m4-cA_1p0k-a1-m4-cB
7 4lus-a2-m1-cC 380 48 0.1728 0.0368 0.2917 2.2 4lus-a2-m1-cD_4lus-a2-m1-cC
8 4lus-a2-m1-cD 378 31 0.1358 0.0291 0.3548 3.2 4lus-a2-m1-cD_4lus-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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