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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ms0-a1-m1-cC 56 56 1.0000 1.0000 1.0000 6.95e-36 2ms0-a1-m1-cA_2ms0-a1-m1-cC
2 2ms0-a1-m1-cA 55 55 0.9821 1.0000 1.0000 5.35e-35 2ms0-a1-m1-cA_2ms0-a1-m1-cC
3 1p9b-a1-m2-cA 424 26 0.1786 0.0236 0.3846 4.0 1p9b-a1-m1-cA_1p9b-a1-m2-cA
4 1p9b-a1-m1-cA 424 26 0.1786 0.0236 0.3846 4.0 1p9b-a1-m1-cA_1p9b-a1-m2-cA
5 7z97-a1-m2-cA 411 40 0.2143 0.0292 0.3000 4.4 7z97-a1-m1-cA_7z97-a1-m2-cA
6 7z97-a1-m1-cA 411 40 0.2143 0.0292 0.3000 4.4 7z97-a1-m1-cA_7z97-a1-m2-cA
7 4avs-a1-m1-cE 204 18 0.1786 0.0490 0.5556 8.1 4avs-a1-m1-cD_4avs-a1-m1-cE
8 4avs-a1-m1-cD 204 18 0.1786 0.0490 0.5556 8.1 4avs-a1-m1-cD_4avs-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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