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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
ATYNDLQVEYGKAQLQMKELMKKFKEIQAQNFSLINENQSLKKNISALIKTARVEINRKD
EEISNLHLEHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6aoz-a1-m1-cA 74 74 1.0000 1.0000 1.0000 7.99e-49 6aoz-a1-m1-cB_6aoz-a1-m1-cA
2 6aoz-a1-m1-cB 69 68 0.9189 0.9855 1.0000 6.63e-44 6aoz-a1-m1-cB_6aoz-a1-m1-cA
3 4pic-a1-m1-cB 150 68 0.2568 0.1267 0.2794 0.46 4pic-a1-m1-cA_4pic-a1-m1-cB
4 4pic-a1-m1-cA 150 68 0.2568 0.1267 0.2794 0.46 4pic-a1-m1-cA_4pic-a1-m1-cB
5 2wkn-a2-m1-cH 408 33 0.1892 0.0343 0.4242 2.2 2wkn-a2-m1-cF_2wkn-a2-m1-cH, 2wkn-a2-m1-cG_2wkn-a2-m1-cH
6 2wkn-a2-m1-cG 408 33 0.1892 0.0343 0.4242 2.2 2wkn-a2-m1-cG_2wkn-a2-m1-cH
7 2wkn-a2-m1-cF 408 33 0.1892 0.0343 0.4242 2.2 2wkn-a2-m1-cF_2wkn-a2-m1-cH
8 6l0t-a1-m1-cB 206 45 0.2027 0.0728 0.3333 3.0 6l0t-a1-m1-cA_6l0t-a1-m1-cB
9 6l0t-a1-m1-cA 206 45 0.2027 0.0728 0.3333 3.1 6l0t-a1-m1-cA_6l0t-a1-m1-cB
10 6r2d-a1-m1-cB 812 45 0.1486 0.0135 0.2444 5.1 6r2d-a1-m1-cB_6r2d-a1-m1-cA
11 6r2d-a1-m1-cA 814 45 0.1486 0.0135 0.2444 5.2 6r2d-a1-m1-cB_6r2d-a1-m1-cA
12 4ud0-a1-m2-cB 350 26 0.1216 0.0257 0.3462 5.5 4ud0-a1-m1-cB_4ud0-a1-m2-cB
13 4ud0-a1-m1-cB 350 26 0.1216 0.0257 0.3462 5.5 4ud0-a1-m1-cB_4ud0-a1-m2-cB
14 1vm6-a1-m1-cB 218 39 0.2432 0.0826 0.4615 6.5 1vm6-a1-m1-cD_1vm6-a1-m1-cB
15 1vm6-a1-m1-cA 215 39 0.2432 0.0837 0.4615 6.6 1vm6-a1-m1-cA_1vm6-a1-m1-cD
16 1vm6-a1-m1-cD 217 39 0.2432 0.0829 0.4615 6.7 1vm6-a1-m1-cA_1vm6-a1-m1-cD, 1vm6-a1-m1-cD_1vm6-a1-m1-cB
17 7say-a2-m1-cD 67 34 0.2027 0.2239 0.4412 7.4 7say-a2-m1-cC_7say-a2-m1-cD
18 2xci-a2-m1-cD 352 64 0.2297 0.0483 0.2656 7.6 2xci-a2-m1-cB_2xci-a2-m1-cD
19 2xci-a2-m1-cB 352 64 0.2297 0.0483 0.2656 7.6 2xci-a2-m1-cB_2xci-a2-m1-cD
20 2ipz-a1-m1-cD 34 32 0.1351 0.2941 0.3125 8.0 2ipz-a1-m1-cA_2ipz-a1-m1-cD
21 2ipz-a1-m1-cC 34 32 0.1351 0.2941 0.3125 8.0 2ipz-a1-m1-cB_2ipz-a1-m1-cC
22 2ipz-a1-m1-cB 34 32 0.1351 0.2941 0.3125 8.0 2ipz-a1-m1-cB_2ipz-a1-m1-cC
23 2ipz-a1-m1-cA 34 32 0.1351 0.2941 0.3125 8.0 2ipz-a1-m1-cA_2ipz-a1-m1-cD
24 8c9t-a2-m1-cC 228 9 0.1081 0.0351 0.8889 8.3 8c9t-a2-m1-cB_8c9t-a2-m1-cC
25 2yo3-a1-m1-cC 257 53 0.2162 0.0623 0.3019 8.6 2yo3-a1-m1-cC_2yo3-a1-m1-cB
26 2yo3-a1-m1-cB 258 53 0.2162 0.0620 0.3019 8.7 2yo3-a1-m1-cC_2yo3-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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