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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
AVADLQRLNIELARKLLEAVARLQELNIDLVRKTSELTDEKTIREEIRKVKEESKRIVEE
AEEEIRRAKEESRYIAD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5izs-a1-m1-cB 77 77 1.0000 1.0000 1.0000 2.68e-45 5izs-a1-m1-cA_5izs-a1-m1-cB
2 5izs-a1-m1-cA 77 77 1.0000 1.0000 1.0000 2.68e-45 5izs-a1-m1-cA_5izs-a1-m1-cB
3 6xi6-a1-m3-cA 269 71 0.8442 0.2416 0.9155 7.46e-34 6xi6-a1-m2-cA_6xi6-a1-m3-cA
4 6xi6-a1-m2-cA 269 71 0.8442 0.2416 0.9155 7.46e-34 6xi6-a1-m2-cA_6xi6-a1-m3-cA
5 7unj-a1-m1-cB 217 55 0.2468 0.0876 0.3455 0.45 7unj-a1-m1-cB_7unj-a1-m1-cA
6 7unj-a1-m1-cA 218 55 0.2468 0.0872 0.3455 0.46 7unj-a1-m1-cB_7unj-a1-m1-cA
7 3m4s-a2-m1-cE 125 50 0.2078 0.1280 0.3200 0.92 3m4s-a2-m1-cD_3m4s-a2-m1-cE
8 3m4s-a2-m1-cD 125 50 0.2078 0.1280 0.3200 0.92 3m4s-a2-m1-cD_3m4s-a2-m1-cE
9 5j73-a2-m1-cC 74 31 0.1948 0.2027 0.4839 4.5 5j73-a2-m1-cD_5j73-a2-m1-cC
10 5j73-a2-m1-cD 73 31 0.1948 0.2055 0.4839 5.3 5j73-a2-m1-cD_5j73-a2-m1-cC
11 1sdo-a1-m2-cA 192 39 0.1558 0.0625 0.3077 5.9 1sdo-a1-m1-cA_1sdo-a1-m2-cA
12 1sdo-a1-m1-cA 192 39 0.1558 0.0625 0.3077 5.9 1sdo-a1-m1-cA_1sdo-a1-m2-cA
13 2poz-a1-m1-cC 367 51 0.2597 0.0545 0.3922 6.6 2poz-a1-m1-cC_2poz-a1-m1-cH
14 2poz-a1-m1-cG 368 51 0.2597 0.0543 0.3922 6.7 2poz-a1-m1-cG_2poz-a1-m1-cH
15 2poz-a1-m1-cB 368 51 0.2597 0.0543 0.3922 6.7 2poz-a1-m1-cB_2poz-a1-m1-cH
16 2poz-a1-m1-cH 370 51 0.2597 0.0541 0.3922 7.6 2poz-a1-m1-cB_2poz-a1-m1-cH, 2poz-a1-m1-cC_2poz-a1-m1-cH, 2poz-a1-m1-cG_2poz-a1-m1-cH
17 6u1s-a1-m1-cN 310 56 0.2857 0.0710 0.3929 9.0 6u1s-a1-m1-cL_6u1s-a1-m1-cN
18 6u1s-a1-m1-cL 310 56 0.2857 0.0710 0.3929 9.0 6u1s-a1-m1-cL_6u1s-a1-m1-cN
19 2a72-a1-m1-cB 133 77 0.2468 0.1429 0.2468 9.4 2a72-a1-m1-cA_2a72-a1-m1-cB
20 2a72-a1-m1-cA 133 77 0.2468 0.1429 0.2468 9.4 2a72-a1-m1-cA_2a72-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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