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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
AVEEIVKVSRNYQVTIPAKVRQKFQIKEGDLVKVTFDESEGVVKIQL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5itm-a3-m1-cD 47 47 1.0000 1.0000 1.0000 2.93e-27 5itm-a3-m1-cC_5itm-a3-m1-cD
2 5itm-a3-m1-cC 47 47 1.0000 1.0000 1.0000 2.93e-27 5itm-a3-m1-cC_5itm-a3-m1-cD
3 5itm-a1-m1-cB 47 47 1.0000 1.0000 1.0000 2.93e-27 5itm-a1-m1-cF_5itm-a1-m1-cB
4 5itm-a1-m1-cF 46 46 0.9787 1.0000 1.0000 1.76e-26 5itm-a1-m1-cF_5itm-a1-m1-cB
5 2oyn-a1-m2-cA 137 22 0.1702 0.0584 0.3636 0.28 2oyn-a1-m1-cA_2oyn-a1-m2-cA
6 2oyn-a1-m1-cA 137 22 0.1702 0.0584 0.3636 0.28 2oyn-a1-m1-cA_2oyn-a1-m2-cA
7 2w1t-a1-m1-cA 175 31 0.2128 0.0571 0.3226 1.4 2w1t-a1-m1-cB_2w1t-a1-m1-cA
8 2w1t-a1-m1-cB 173 25 0.1915 0.0520 0.3600 2.2 2w1t-a1-m1-cB_2w1t-a1-m1-cA
9 2d62-a1-m2-cA 361 35 0.2766 0.0360 0.3714 4.2 2d62-a1-m1-cA_2d62-a1-m2-cA
10 2d62-a1-m1-cA 361 35 0.2766 0.0360 0.3714 4.2 2d62-a1-m1-cA_2d62-a1-m2-cA
11 4pdx-a1-m1-cA 606 28 0.2340 0.0182 0.3929 4.9 4pdx-a1-m1-cB_4pdx-a1-m1-cA
12 4pdx-a1-m1-cB 603 28 0.2340 0.0182 0.3929 5.1 4pdx-a1-m1-cB_4pdx-a1-m1-cA
13 6wm8-a1-m1-cC 353 18 0.2128 0.0283 0.5556 5.3 6wm8-a1-m1-cC_6wm8-a1-m1-cA
14 6wm8-a1-m1-cA 354 18 0.2128 0.0282 0.5556 5.6 6wm8-a1-m1-cC_6wm8-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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