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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
AVEKTNSSSSLAEVIDRILDKGIVIDAWVRVSLVGIELLAIEARIVIASVETYLKYAEAV
GLTQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8gbs-a1-m1-cA4 65 65 1.0000 1.0000 1.0000 4.38e-39 8gbs-a1-m1-cA3_8gbs-a1-m1-cA4
2 8gbs-a1-m1-cA3 65 65 1.0000 1.0000 1.0000 4.38e-39 8gbs-a1-m1-cA3_8gbs-a1-m1-cA4
3 2yfo-a1-m4-cA 719 33 0.1538 0.0139 0.3030 2.8 2yfo-a1-m1-cA_2yfo-a1-m4-cA, 2yfo-a1-m2-cA_2yfo-a1-m4-cA, 2yfo-a1-m3-cA_2yfo-a1-m4-cA
4 2yfo-a1-m3-cA 719 33 0.1538 0.0139 0.3030 2.8 2yfo-a1-m3-cA_2yfo-a1-m4-cA
5 2yfo-a1-m2-cA 719 33 0.1538 0.0139 0.3030 2.8 2yfo-a1-m2-cA_2yfo-a1-m4-cA
6 2yfo-a1-m1-cA 719 33 0.1538 0.0139 0.3030 2.8 2yfo-a1-m1-cA_2yfo-a1-m4-cA
7 2qmx-a2-m2-cB 275 42 0.2154 0.0509 0.3333 6.4 2qmx-a2-m1-cA_2qmx-a2-m2-cB, 2qmx-a2-m2-cA_2qmx-a2-m2-cB
8 2qmx-a2-m2-cA 275 42 0.2154 0.0509 0.3333 6.4 2qmx-a2-m2-cA_2qmx-a2-m2-cB
9 2qmx-a2-m1-cA 275 42 0.2154 0.0509 0.3333 6.4 2qmx-a2-m1-cA_2qmx-a2-m2-cB
10 6sdk-a2-m1-cD 196 41 0.2308 0.0765 0.3659 6.9 6sdk-a2-m1-cC_6sdk-a2-m1-cD
11 6sdk-a2-m1-cC 196 41 0.2308 0.0765 0.3659 6.9 6sdk-a2-m1-cC_6sdk-a2-m1-cD
12 3ddc-a1-m2-cB 133 29 0.1538 0.0752 0.3448 7.7 3ddc-a1-m1-cB_3ddc-a1-m2-cB
13 3ddc-a1-m1-cB 133 29 0.1538 0.0752 0.3448 7.7 3ddc-a1-m1-cB_3ddc-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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