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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
AVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWD
LYCAAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6iwv-a1-m2-cA 66 66 1.0000 1.0000 1.0000 1.54e-45 6iwv-a1-m1-cA_6iwv-a1-m2-cA
2 6iwv-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.54e-45 6iwv-a1-m1-cA_6iwv-a1-m2-cA
3 6s9r-a1-m2-cB 61 61 0.8788 0.9508 0.9508 1.54e-40 6s9r-a1-m2-cA_6s9r-a1-m2-cB
4 6s9r-a1-m2-cA 60 60 0.8636 0.9500 0.9500 1.74e-39 6s9r-a1-m2-cA_6s9r-a1-m2-cB
5 5fph-a1-m2-cA 385 38 0.1970 0.0338 0.3421 0.50 5fph-a1-m1-cA_5fph-a1-m2-cA
6 5fph-a1-m1-cA 385 38 0.1970 0.0338 0.3421 0.50 5fph-a1-m1-cA_5fph-a1-m2-cA
7 4wlh-a1-m1-cB 411 46 0.2121 0.0341 0.3043 1.7 4wlh-a1-m1-cB_4wlh-a1-m1-cA
8 4wlh-a1-m1-cA 412 46 0.2121 0.0340 0.3043 1.7 4wlh-a1-m1-cB_4wlh-a1-m1-cA
9 5fph-a6-m1-cD 386 39 0.1970 0.0337 0.3333 6.1 5fph-a6-m1-cF_5fph-a6-m1-cD
10 5fph-a4-m1-cD 386 39 0.1970 0.0337 0.3333 6.1 5fph-a4-m1-cC_5fph-a4-m1-cD
11 5fph-a7-m1-cG 389 39 0.1970 0.0334 0.3333 6.1 5fph-a7-m1-cF_5fph-a7-m1-cG
12 7dvv-a1-m1-cA 139 29 0.1970 0.0935 0.4483 6.3 7dvv-a1-m1-cA_7dvv-a1-m1-cB
13 7dvs-a1-m1-cA 139 29 0.1970 0.0935 0.4483 6.3 7dvs-a1-m1-cB_7dvs-a1-m1-cA
14 7dvs-a1-m1-cB 138 29 0.1970 0.0942 0.4483 6.5 7dvs-a1-m1-cB_7dvs-a1-m1-cA
15 7dvv-a1-m1-cB 140 29 0.1970 0.0929 0.4483 6.7 7dvv-a1-m1-cA_7dvv-a1-m1-cB
16 7dvr-a1-m2-cA 147 29 0.1970 0.0884 0.4483 6.8 7dvr-a1-m1-cA_7dvr-a1-m2-cA
17 7dvr-a1-m1-cA 147 29 0.1970 0.0884 0.4483 6.8 7dvr-a1-m1-cA_7dvr-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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