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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
AVSDVWSLSKTSTFQPKKASLQPLTISLDELFSSRGEFISVGGNGRSHKEAILLGLRYKK
LYNQARVKYSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hhw-a1-m2-cD 71 71 1.0000 1.0000 1.0000 2.92e-47 3hhw-a1-m2-cC_3hhw-a1-m2-cD
2 3hhw-a1-m2-cC 71 71 1.0000 1.0000 1.0000 2.92e-47 3hhw-a1-m2-cC_3hhw-a1-m2-cD
3 1vmh-a1-m3-cA 129 45 0.1690 0.0930 0.2667 0.30 1vmh-a1-m2-cA_1vmh-a1-m3-cA
4 1vmh-a1-m2-cA 129 45 0.1690 0.0930 0.2667 0.30 1vmh-a1-m2-cA_1vmh-a1-m3-cA
5 7wzo-a1-m1-cB 112 33 0.2113 0.1339 0.4545 1.7 7wzo-a1-m1-cC_7wzo-a1-m1-cB
6 7ti9-a1-m2-cA 112 33 0.2113 0.1339 0.4545 1.8 7ti9-a1-m1-cA_7ti9-a1-m2-cA
7 7ti9-a1-m1-cA 112 33 0.2113 0.1339 0.4545 1.8 7ti9-a1-m1-cA_7ti9-a1-m2-cA
8 7wzo-a1-m1-cC 110 33 0.2113 0.1364 0.4545 1.8 7wzo-a1-m1-cC_7wzo-a1-m1-cB
9 2p4g-a1-m2-cA 246 37 0.1831 0.0528 0.3514 3.1 2p4g-a1-m1-cA_2p4g-a1-m2-cA
10 2p4g-a1-m1-cA 246 37 0.1831 0.0528 0.3514 3.1 2p4g-a1-m1-cA_2p4g-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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