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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
AVTCGQVDANLAPCVPFLTQGGEPGAACCSGVKTLNGNAQSPDDRKTACNCIKAAANRYP
NLKDDAAQSLPSKCGISLNVPISRTINCDTIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6iwo-a1-m2-cA 92 92 1.0000 1.0000 1.0000 1.38e-62 6iwo-a1-m1-cB_6iwo-a1-m2-cA
2 6iwm-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.38e-62 6iwm-a1-m2-cB_6iwm-a1-m1-cA
3 6iwo-a1-m1-cB 90 90 0.9783 1.0000 1.0000 2.19e-61 6iwo-a1-m1-cB_6iwo-a1-m2-cA
4 6iwm-a1-m2-cB 90 90 0.9783 1.0000 1.0000 2.19e-61 6iwm-a1-m2-cB_6iwm-a1-m1-cA
5 7ksb-a3-m1-cB 92 92 0.5326 0.5326 0.5326 6.31e-32 7ksb-a3-m1-cA_7ksb-a3-m1-cB
6 7ksb-a3-m1-cA 92 92 0.5326 0.5326 0.5326 6.31e-32 7ksb-a3-m1-cA_7ksb-a3-m1-cB
7 1uva-a1-m2-cA 91 91 0.4565 0.4615 0.4615 1.01e-23 1uva-a1-m1-cA_1uva-a1-m2-cA
8 1uva-a1-m1-cA 91 91 0.4565 0.4615 0.4615 1.01e-23 1uva-a1-m1-cA_1uva-a1-m2-cA
9 2alg-a6-m2-cB 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a6-m1-cB_2alg-a6-m2-cB
10 2alg-a6-m1-cB 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a6-m1-cB_2alg-a6-m2-cB
11 2alg-a5-m4-cA 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a5-m1-cB_2alg-a5-m4-cA
12 2alg-a5-m1-cB 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a5-m1-cB_2alg-a5-m4-cA
13 2alg-a4-m6-cA 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a4-m1-cB_2alg-a4-m6-cA
14 2alg-a4-m1-cB 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a4-m1-cB_2alg-a4-m6-cA
15 2alg-a3-m4-cA 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a3-m2-cB_2alg-a3-m4-cA
16 2alg-a3-m2-cB 92 90 0.4130 0.4130 0.4222 1.98e-22 2alg-a3-m2-cB_2alg-a3-m4-cA
17 7ksc-a6-m1-cD 93 92 0.4239 0.4194 0.4239 1.74e-20 7ksc-a6-m1-cB_7ksc-a6-m1-cD
18 7ksc-a6-m1-cB 93 92 0.4239 0.4194 0.4239 1.74e-20 7ksc-a6-m1-cB_7ksc-a6-m1-cD

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Reference:
Jacob Schwartz et al.

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