Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=73)
AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ
KIIQKILNKGKAN

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1mi2-a1-m1-cB 73 73 1.0000 1.0000 1.0000 2.02e-48 1mi2-a1-m1-cA_1mi2-a1-m1-cB
2 1mi2-a1-m1-cA 73 73 1.0000 1.0000 1.0000 2.02e-48 1mi2-a1-m1-cA_1mi2-a1-m1-cB
3 3n52-a3-m1-cB 71 71 0.9726 1.0000 1.0000 8.36e-47 3n52-a3-m1-cD_3n52-a3-m1-cB
4 3n52-a3-m1-cD 70 70 0.9589 1.0000 1.0000 3.47e-46 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
5 3n52-a3-m1-cC 67 67 0.9178 1.0000 1.0000 3.71e-44 3n52-a3-m1-cC_3n52-a3-m1-cD
6 1msh-a1-m1-cB 72 72 0.6438 0.6528 0.6528 2.97e-29 1msh-a1-m1-cA_1msh-a1-m1-cB
7 1msh-a1-m1-cA 72 72 0.6438 0.6528 0.6528 2.97e-29 1msh-a1-m1-cA_1msh-a1-m1-cB
8 6wzk-a1-m1-cF 64 64 0.6301 0.7188 0.7188 9.08e-28 6wzk-a1-m1-cE_6wzk-a1-m1-cF
9 6wzk-a1-m1-cE 64 64 0.6301 0.7188 0.7188 9.08e-28 6wzk-a1-m1-cE_6wzk-a1-m1-cF
10 6wzj-a1-m1-cE 63 63 0.6027 0.6984 0.6984 9.89e-27 6wzj-a1-m1-cF_6wzj-a1-m1-cE
11 6wzj-a1-m1-cF 59 62 0.5616 0.6949 0.6613 7.98e-23 6wzj-a1-m1-cF_6wzj-a1-m1-cE
12 1tvx-a1-m1-cD 71 65 0.5205 0.5352 0.5846 2.21e-21 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
13 1tvx-a1-m1-cB 71 65 0.5205 0.5352 0.5846 2.21e-21 1tvx-a1-m1-cB_1tvx-a1-m1-cD
14 1rod-a1-m1-cB 72 71 0.5068 0.5139 0.5211 1.11e-20 1rod-a1-m1-cA_1rod-a1-m1-cB
15 1rod-a1-m1-cA 72 71 0.5068 0.5139 0.5211 1.11e-20 1rod-a1-m1-cA_1rod-a1-m1-cB
16 1tvx-a1-m1-cC 64 61 0.5068 0.5781 0.6066 3.34e-20 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
17 1tvx-a1-m1-cA 64 61 0.5068 0.5781 0.6066 3.34e-20 1tvx-a1-m1-cA_1tvx-a1-m1-cC
18 1pfn-a1-m1-cD 68 65 0.4932 0.5294 0.5538 6.13e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cD
19 1pfn-a1-m1-cC 68 65 0.4932 0.5294 0.5538 6.13e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC
20 1pfn-a1-m1-cB 68 65 0.4932 0.5294 0.5538 6.13e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
21 2mgs-a1-m1-cB 71 65 0.4795 0.4930 0.5385 3.35e-19 2mgs-a1-m1-cA_2mgs-a1-m1-cB
22 2mgs-a1-m1-cA 71 65 0.4795 0.4930 0.5385 3.35e-19 2mgs-a1-m1-cA_2mgs-a1-m1-cB
23 4r9w-a1-m2-cB 64 63 0.4384 0.5000 0.5079 9.88e-17 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
24 4r9y-a1-m1-cD 65 63 0.4384 0.4923 0.5079 1.05e-16 4r9y-a1-m1-cB_4r9y-a1-m1-cD
25 4r9y-a1-m1-cB 65 63 0.4384 0.4923 0.5079 1.05e-16 4r9y-a1-m1-cB_4r9y-a1-m1-cD
26 4r9w-a1-m2-cA 62 62 0.4384 0.5161 0.5161 1.94e-16 4r9w-a1-m2-cA_4r9w-a1-m2-cB
27 4r9w-a1-m1-cA 62 62 0.4384 0.5161 0.5161 1.94e-16 4r9w-a1-m1-cA_4r9w-a1-m2-cB
28 1f9q-a1-m1-cC 62 61 0.4247 0.5000 0.5082 7.06e-16 1f9q-a1-m1-cB_1f9q-a1-m1-cC
29 1f9q-a1-m1-cB 62 61 0.4247 0.5000 0.5082 7.06e-16 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 4hsv-a1-m1-cD 65 63 0.4110 0.4615 0.4762 3.36e-14 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
31 4hsv-a1-m1-cA 65 63 0.4110 0.4615 0.4762 3.36e-14 4hsv-a1-m1-cA_4hsv-a1-m1-cD
32 1plf-a1-m1-cD 65 62 0.3973 0.4462 0.4677 3.47e-14 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
33 1plf-a1-m1-cB 65 62 0.3973 0.4462 0.4677 3.47e-14 1plf-a1-m1-cB_1plf-a1-m1-cD
34 1qe6-a3-m2-cB 71 69 0.3973 0.4085 0.4203 5.46e-14 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
35 1qe6-a3-m1-cD 72 69 0.3973 0.4028 0.4203 5.66e-14 1qe6-a3-m2-cB_1qe6-a3-m1-cD
36 1plf-a1-m1-cC 63 61 0.3973 0.4603 0.4754 7.28e-14 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
37 1plf-a1-m1-cA 63 61 0.3973 0.4603 0.4754 7.28e-14 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
38 4hsv-a1-m1-cC 59 58 0.3836 0.4746 0.4828 4.21e-13 4hsv-a1-m1-cC_4hsv-a1-m1-cD
39 1qe6-a3-m2-cA 68 65 0.3699 0.3971 0.4154 7.73e-13 1qe6-a3-m2-cA_1qe6-a3-m2-cB
40 1o7y-a1-m1-cA 67 66 0.2466 0.2687 0.2727 2.19e-05 1o7y-a1-m1-cC_1o7y-a1-m1-cA
41 1o7y-a1-m1-cC 63 62 0.2466 0.2857 0.2903 2.25e-05 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
42 1o7y-a1-m1-cD 62 61 0.2466 0.2903 0.2951 3.30e-05 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 50 0.2055 0.2419 0.3000 1.34e-04 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 4uai-a1-m1-cA 68 68 0.3014 0.3235 0.3235 1.96e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
45 4uai-a1-m1-cB 67 68 0.3014 0.3284 0.3235 2.14e-04 4uai-a1-m1-cB_4uai-a1-m1-cA
46 3hp3-a3-m1-cF 65 67 0.2877 0.3231 0.3134 7.13e-04 3hp3-a3-m1-cD_3hp3-a3-m1-cF
47 2r3z-a1-m1-cD 64 63 0.2466 0.2812 0.2857 0.002 2r3z-a1-m1-cD_2r3z-a1-m1-cA
48 3hp3-a3-m1-cD 64 63 0.2740 0.3125 0.3175 0.002 3hp3-a3-m1-cD_3hp3-a3-m1-cF
49 2r3z-a1-m1-cA 68 64 0.2466 0.2647 0.2812 0.002 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
50 2r3z-a1-m1-cB 67 64 0.2466 0.2687 0.2812 0.002 2r3z-a1-m1-cB_2r3z-a1-m1-cA
51 2n54-a1-m1-cB 66 56 0.2329 0.2576 0.3036 0.029 2n54-a1-m1-cA_2n54-a1-m1-cB
52 2n54-a1-m1-cA 66 56 0.2329 0.2576 0.3036 0.029 2n54-a1-m1-cA_2n54-a1-m1-cB
53 4mhe-a2-m1-cB 69 35 0.1781 0.1884 0.3714 0.095 4mhe-a2-m1-cC_4mhe-a2-m1-cB
54 4mhe-a2-m1-cC 61 35 0.1781 0.2131 0.3714 0.095 4mhe-a2-m1-cC_4mhe-a2-m1-cB
55 2ra4-a4-m4-cB 65 50 0.1781 0.2000 0.2600 0.35 2ra4-a4-m2-cB_2ra4-a4-m4-cB
56 2ra4-a4-m2-cB 65 50 0.1781 0.2000 0.2600 0.35 2ra4-a4-m2-cB_2ra4-a4-m4-cB
57 2ra4-a2-m4-cB 65 50 0.1781 0.2000 0.2600 0.35 2ra4-a2-m4-cA_2ra4-a2-m4-cB
58 2ra4-a2-m4-cA 65 50 0.1781 0.2000 0.2600 0.35 2ra4-a2-m4-cA_2ra4-a2-m4-cB
59 2fj2-a2-m1-cD 67 40 0.1781 0.1940 0.3250 0.76 2fj2-a2-m1-cD_2fj2-a2-m1-cC
60 2fj2-a2-m1-cC 68 40 0.1781 0.1912 0.3250 0.76 2fj2-a2-m1-cD_2fj2-a2-m1-cC
61 1qz1-a1-m2-cA 288 48 0.2466 0.0625 0.3750 1.4 1qz1-a1-m1-cA_1qz1-a1-m2-cA
62 1qz1-a1-m1-cA 288 48 0.2466 0.0625 0.3750 1.4 1qz1-a1-m1-cA_1qz1-a1-m2-cA
63 2jp1-a1-m1-cB 60 24 0.1507 0.1833 0.4583 1.7 2jp1-a1-m1-cA_2jp1-a1-m1-cB
64 2jp1-a1-m1-cA 60 24 0.1507 0.1833 0.4583 1.7 2jp1-a1-m1-cA_2jp1-a1-m1-cB
65 1ncv-a1-m1-cB 76 39 0.1507 0.1447 0.2821 2.2 1ncv-a1-m1-cA_1ncv-a1-m1-cB
66 1ncv-a1-m1-cA 76 39 0.1507 0.1447 0.2821 2.2 1ncv-a1-m1-cA_1ncv-a1-m1-cB
67 5yam-a1-m1-cB 69 52 0.1918 0.2029 0.2692 2.9 5yam-a1-m1-cA_5yam-a1-m1-cB
68 5yam-a1-m1-cA 69 52 0.1918 0.2029 0.2692 2.9 5yam-a1-m1-cA_5yam-a1-m1-cB
69 1fjj-a1-m2-cA 154 35 0.1507 0.0714 0.3143 4.7 1fjj-a1-m1-cA_1fjj-a1-m2-cA
70 1fjj-a1-m1-cA 154 35 0.1507 0.0714 0.3143 4.7 1fjj-a1-m1-cA_1fjj-a1-m2-cA
71 2q8r-a2-m1-cG 63 32 0.1233 0.1429 0.2812 6.5 2q8r-a2-m1-cF_2q8r-a2-m1-cG
72 2q8r-a2-m1-cF 63 32 0.1233 0.1429 0.2812 6.5 2q8r-a2-m1-cF_2q8r-a2-m1-cG
73 4k0j-a2-m1-cE 954 25 0.1507 0.0115 0.4400 7.8 4k0j-a2-m1-cE_4k0j-a2-m1-cD
74 4k0j-a2-m1-cD 958 25 0.1507 0.0115 0.4400 8.4 4k0j-a2-m1-cE_4k0j-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600