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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
AVVKVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWKYRFGDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1htr-a1-m2-cP 43 43 1.0000 1.0000 1.0000 3.05e-26 1htr-a1-m1-cP_1htr-a1-m2-cP
2 1htr-a1-m1-cP 43 43 1.0000 1.0000 1.0000 3.05e-26 1htr-a1-m1-cP_1htr-a1-m2-cP
3 2psg-a1-m2-cA 369 37 0.4419 0.0515 0.5135 1.96e-07 2psg-a1-m2-cA_2psg-a1-m1-cA
4 2psg-a1-m1-cA 369 37 0.4419 0.0515 0.5135 1.96e-07 2psg-a1-m2-cA_2psg-a1-m1-cA
5 3rrp-a1-m2-cB 460 27 0.2558 0.0239 0.4074 0.55 3rrp-a1-m1-cB_3rrp-a1-m2-cB, 3rrp-a1-m2-cB_3rrp-a1-m1-cA, 3rrp-a1-m2-cB_3rrp-a1-m2-cA
6 3rrp-a1-m1-cB 460 27 0.2558 0.0239 0.4074 0.55 3rrp-a1-m1-cB_3rrp-a1-m2-cB
7 3rrp-a1-m2-cA 465 27 0.2558 0.0237 0.4074 0.55 3rrp-a1-m2-cB_3rrp-a1-m2-cA
8 3rrp-a1-m1-cA 465 27 0.2558 0.0237 0.4074 0.55 3rrp-a1-m2-cB_3rrp-a1-m1-cA
9 4amt-a1-m2-cA 349 19 0.2093 0.0258 0.4737 1.4 4amt-a1-m1-cA_4amt-a1-m2-cA
10 4amt-a1-m1-cA 349 19 0.2093 0.0258 0.4737 1.4 4amt-a1-m1-cA_4amt-a1-m2-cA
11 7zb5-a1-m1-cE 1447 19 0.2093 0.0062 0.4737 2.0 7zb5-a1-m1-cE_7zb5-a1-m1-cH
12 7zb5-a1-m1-cH 1449 19 0.2093 0.0062 0.4737 2.0 7zb5-a1-m1-cE_7zb5-a1-m1-cH
13 7p0x-a1-m1-cA 575 19 0.2093 0.0157 0.4737 3.8 7p0x-a1-m1-cA_7p0x-a1-m1-cB
14 7p0x-a1-m1-cB 580 19 0.2093 0.0155 0.4737 3.9 7p0x-a1-m1-cA_7p0x-a1-m1-cB
15 4mbb-a2-m3-cA 184 27 0.2558 0.0598 0.4074 5.3 4mbb-a2-m2-cA_4mbb-a2-m3-cA
16 4mbb-a2-m2-cA 184 27 0.2558 0.0598 0.4074 5.3 4mbb-a2-m2-cA_4mbb-a2-m3-cA
17 3rd8-a1-m4-cA 457 23 0.2326 0.0219 0.4348 5.6 3rd8-a1-m1-cA_3rd8-a1-m4-cA, 3rd8-a1-m2-cA_3rd8-a1-m4-cA, 3rd8-a1-m3-cA_3rd8-a1-m4-cA
18 3rd8-a1-m3-cA 457 23 0.2326 0.0219 0.4348 5.6 3rd8-a1-m3-cA_3rd8-a1-m4-cA
19 3rd8-a1-m2-cA 457 23 0.2326 0.0219 0.4348 5.6 3rd8-a1-m2-cA_3rd8-a1-m4-cA
20 3rd8-a1-m1-cA 457 23 0.2326 0.0219 0.4348 5.6 3rd8-a1-m1-cA_3rd8-a1-m4-cA
21 1flg-a1-m1-cB 582 12 0.1860 0.0137 0.6667 7.0 1flg-a1-m1-cA_1flg-a1-m1-cB
22 1flg-a1-m1-cA 582 12 0.1860 0.0137 0.6667 7.0 1flg-a1-m1-cA_1flg-a1-m1-cB
23 5j6f-a1-m2-cB 340 45 0.3488 0.0441 0.3333 7.7 5j6f-a1-m1-cB_5j6f-a1-m2-cB, 5j6f-a1-m2-cB_5j6f-a1-m1-cA, 5j6f-a1-m2-cB_5j6f-a1-m2-cA
24 5j6f-a1-m1-cB 340 45 0.3488 0.0441 0.3333 7.7 5j6f-a1-m1-cB_5j6f-a1-m2-cB
25 5j6f-a1-m2-cA 352 45 0.3488 0.0426 0.3333 9.1 5j6f-a1-m2-cB_5j6f-a1-m2-cA
26 5j6f-a1-m1-cA 352 45 0.3488 0.0426 0.3333 9.1 5j6f-a1-m2-cB_5j6f-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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