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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
AVYKTHVEKDFIAFCSSTPHNVSWRDSTMGSIFITQLITCFQKYSWCCHLEEVFRKVQQS
FETPRAKAQMPTIERLSMTRYFYLFPGN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kmz-a2-m1-cd 88 88 1.0000 1.0000 1.0000 3.79e-64 6kmz-a2-m1-cc_6kmz-a2-m1-cd
2 6kmz-a2-m1-cc 88 88 1.0000 1.0000 1.0000 3.79e-64 6kmz-a2-m1-cc_6kmz-a2-m1-cd
3 3e4c-a1-m1-cB 257 88 0.6364 0.2179 0.6364 3.57e-37 3e4c-a1-m1-cB_3e4c-a1-m1-cA
4 3e4c-a1-m1-cA 271 88 0.6364 0.2066 0.6364 5.53e-37 3e4c-a1-m1-cB_3e4c-a1-m1-cA
5 6pdq-a1-m1-cE 85 86 0.2841 0.2941 0.2907 4.72e-06 6pdq-a1-m1-cE_6pdq-a1-m1-cB
6 4jqy-a1-m1-cB 205 88 0.3636 0.1561 0.3636 8.16e-05 4jqy-a1-m1-cA_4jqy-a1-m1-cB
7 6pdq-a1-m1-cB 87 88 0.2727 0.2759 0.2727 2.37e-04 6pdq-a1-m1-cE_6pdq-a1-m1-cB
8 7jl7-a1-m1-cC 96 90 0.3295 0.3021 0.3222 7.02e-04 7jl7-a1-m1-cD_7jl7-a1-m1-cC
9 7jl7-a1-m1-cD 94 90 0.3295 0.3085 0.3222 7.17e-04 7jl7-a1-m1-cD_7jl7-a1-m1-cC
10 3sip-a2-m1-cD 100 35 0.1705 0.1500 0.4286 0.046 3sip-a2-m1-cD_3sip-a2-m1-cB
11 3sip-a2-m1-cB 103 35 0.1705 0.1456 0.4286 0.048 3sip-a2-m1-cD_3sip-a2-m1-cB
12 3sir-a1-m1-cA 214 79 0.2614 0.1075 0.2911 0.052 3sir-a1-m1-cB_3sir-a1-m1-cA
13 3k7e-a1-m1-cC 212 77 0.2273 0.0943 0.2597 0.077 3k7e-a1-m1-cB_3k7e-a1-m1-cC
14 1m72-a2-m2-cC 252 35 0.1591 0.0556 0.4000 0.22 1m72-a2-m1-cC_1m72-a2-m2-cC
15 1m72-a2-m1-cC 252 35 0.1591 0.0556 0.4000 0.22 1m72-a2-m1-cC_1m72-a2-m2-cC
16 4fxo-a1-m1-cB 227 92 0.2955 0.1145 0.2826 0.26 4fxo-a1-m1-cD_4fxo-a1-m1-cB
17 3nvq-a1-m1-cE 588 34 0.1250 0.0187 0.3235 1.0 3nvq-a1-m1-cA_3nvq-a1-m1-cE
18 3nvq-a1-m1-cA 588 34 0.1250 0.0187 0.3235 1.0 3nvq-a1-m1-cA_3nvq-a1-m1-cE
19 4fxo-a1-m1-cD 220 88 0.2500 0.1000 0.2500 1.1 4fxo-a1-m1-cD_4fxo-a1-m1-cB
20 1pyo-a1-m1-cB 98 87 0.2159 0.1939 0.2184 1.8 1pyo-a1-m1-cB_1pyo-a1-m1-cD
21 1pyo-a1-m1-cD 99 87 0.2159 0.1919 0.2184 1.9 1pyo-a1-m1-cB_1pyo-a1-m1-cD
22 1s49-a2-m2-cA 576 17 0.1136 0.0174 0.5882 5.0 1s49-a2-m1-cA_1s49-a2-m2-cA
23 1s49-a2-m1-cA 576 17 0.1136 0.0174 0.5882 5.0 1s49-a2-m1-cA_1s49-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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