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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
AWKVSVDQDTCIGCAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSA
ITIEEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dhv-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.06e-42 4dhv-a1-m1-cB_4dhv-a1-m1-cA
2 3pni-a3-m2-cA 66 66 1.0000 1.0000 1.0000 1.06e-42 3pni-a3-m1-cB_3pni-a3-m2-cA
3 3pni-a3-m1-cB 66 66 1.0000 1.0000 1.0000 1.06e-42 3pni-a3-m1-cB_3pni-a3-m2-cA
4 1sj1-a1-m1-cB 66 66 0.9848 0.9848 0.9848 3.95e-41 1sj1-a1-m1-cA_1sj1-a1-m1-cB
5 1sj1-a1-m1-cA 66 66 0.9848 0.9848 0.9848 3.95e-41 1sj1-a1-m1-cA_1sj1-a1-m1-cB
6 4dhv-a1-m1-cB 65 66 0.9848 1.0000 0.9848 3.57e-40 4dhv-a1-m1-cB_4dhv-a1-m1-cA
7 1fxd-a1-m2-cA 57 55 0.3636 0.4211 0.4364 1.10e-06 1fxd-a1-m1-cA_1fxd-a1-m2-cA
8 1fxd-a1-m1-cA 57 55 0.3636 0.4211 0.4364 1.10e-06 1fxd-a1-m1-cA_1fxd-a1-m2-cA
9 1fxr-a1-m1-cB 64 67 0.4394 0.4531 0.4328 8.44e-05 1fxr-a1-m1-cA_1fxr-a1-m1-cB
10 1fxr-a1-m1-cA 64 67 0.4394 0.4531 0.4328 8.44e-05 1fxr-a1-m1-cA_1fxr-a1-m1-cB
11 8c0z-a1-m1-cF 158 63 0.3788 0.1582 0.3968 0.007 8c0z-a1-m1-cC_8c0z-a1-m1-cF
12 8c0z-a1-m1-cC 158 63 0.3788 0.1582 0.3968 0.007 8c0z-a1-m1-cC_8c0z-a1-m1-cF
13 5t61-a2-m1-cj 344 71 0.3485 0.0669 0.3239 0.010 5t61-a2-m1-cd_5t61-a2-m1-cj
14 5t61-a2-m1-cj 344 62 0.3182 0.0610 0.3387 0.014 5t61-a2-m1-cd_5t61-a2-m1-cj
15 5t61-a2-m1-cj 344 64 0.3030 0.0581 0.3125 0.11 5t61-a2-m1-cd_5t61-a2-m1-cj
16 5t61-a2-m1-cj 344 74 0.3485 0.0669 0.3108 0.40 5t61-a2-m1-cd_5t61-a2-m1-cj
17 5t61-a2-m1-cv 346 71 0.3485 0.0665 0.3239 0.010 5t61-a2-m1-cd_5t61-a2-m1-cv
18 5t61-a2-m1-cv 346 62 0.3182 0.0607 0.3387 0.015 5t61-a2-m1-cd_5t61-a2-m1-cv
19 5t61-a2-m1-cv 346 64 0.3030 0.0578 0.3125 0.11 5t61-a2-m1-cd_5t61-a2-m1-cv
20 5t61-a2-m1-cv 346 74 0.3485 0.0665 0.3108 0.40 5t61-a2-m1-cd_5t61-a2-m1-cv
21 5t61-a2-m1-cd 340 71 0.3485 0.0676 0.3239 0.010 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
22 5t61-a2-m1-cd 340 62 0.3182 0.0618 0.3387 0.014 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
23 5t61-a2-m1-cd 340 64 0.3030 0.0588 0.3125 0.12 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
24 5t61-a2-m1-cd 340 74 0.3485 0.0676 0.3108 0.40 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
25 1hfe-a3-m1-cM 396 60 0.2879 0.0480 0.3167 0.56 1hfe-a3-m1-cL_1hfe-a3-m1-cM
26 1hfe-a3-m1-cL 396 60 0.2879 0.0480 0.3167 0.56 1hfe-a3-m1-cL_1hfe-a3-m1-cM
27 2c42-a1-m1-cB 1231 21 0.1061 0.0057 0.3333 1.0 2c42-a1-m1-cA_2c42-a1-m1-cB
28 2c42-a1-m1-cA 1231 21 0.1061 0.0057 0.3333 1.0 2c42-a1-m1-cA_2c42-a1-m1-cB
29 7qv7-a1-m1-cX 183 75 0.2879 0.1038 0.2533 1.5 7qv7-a1-m1-cJ_7qv7-a1-m1-cX
30 7qv7-a1-m1-cP 183 75 0.2879 0.1038 0.2533 1.5 7qv7-a1-m1-cJ_7qv7-a1-m1-cP
31 7qv7-a1-m1-cJ 183 75 0.2879 0.1038 0.2533 1.5 7qv7-a1-m1-cJ_7qv7-a1-m1-cP, 7qv7-a1-m1-cJ_7qv7-a1-m1-cX
32 5odq-a1-m1-cG 652 29 0.1515 0.0153 0.3448 1.8 5odq-a1-m1-cA_5odq-a1-m1-cG
33 5odq-a1-m1-cG 652 18 0.1364 0.0138 0.5000 5.1 5odq-a1-m1-cA_5odq-a1-m1-cG
34 5odq-a1-m1-cA 652 29 0.1515 0.0153 0.3448 1.8 5odq-a1-m1-cA_5odq-a1-m1-cG
35 5odq-a1-m1-cA 652 18 0.1364 0.0138 0.5000 5.1 5odq-a1-m1-cA_5odq-a1-m1-cG
36 1kqf-a1-m3-cB 289 61 0.2424 0.0554 0.2623 3.2 1kqf-a1-m2-cB_1kqf-a1-m3-cB
37 1kqf-a1-m2-cB 289 61 0.2424 0.0554 0.2623 3.2 1kqf-a1-m2-cB_1kqf-a1-m3-cB
38 2v4j-a1-m1-cD 436 31 0.1515 0.0229 0.3226 3.9 2v4j-a1-m1-cA_2v4j-a1-m1-cD
39 2v4j-a1-m1-cA 436 31 0.1515 0.0229 0.3226 3.9 2v4j-a1-m1-cA_2v4j-a1-m1-cD
40 7bkc-a1-m1-ca 662 30 0.1818 0.0181 0.4000 4.8 7bkc-a1-m1-cA_7bkc-a1-m1-ca
41 7bkc-a1-m1-cA 662 30 0.1818 0.0181 0.4000 4.8 7bkc-a1-m1-cA_7bkc-a1-m1-ca
42 4z3x-a1-m1-cF 170 42 0.1818 0.0706 0.2857 5.2 4z3x-a1-m1-cE_4z3x-a1-m1-cF
43 4z3x-a1-m1-cE 166 42 0.1818 0.0723 0.2857 5.3 4z3x-a1-m1-cE_4z3x-a1-m1-cF
44 6brg-a5-m1-cD 500 28 0.1818 0.0240 0.4286 5.5 6brg-a5-m1-cC_6brg-a5-m1-cD
45 6brg-a5-m1-cC 500 28 0.1818 0.0240 0.4286 5.5 6brg-a5-m1-cC_6brg-a5-m1-cD
46 2vpy-a1-m1-cF 193 33 0.1667 0.0570 0.3333 5.7 2vpy-a1-m1-cB_2vpy-a1-m1-cF
47 2vpy-a1-m1-cB 193 33 0.1667 0.0570 0.3333 5.7 2vpy-a1-m1-cB_2vpy-a1-m1-cF
48 6kbi-a1-m1-cA 550 48 0.2121 0.0255 0.2917 5.8 6kbi-a1-m1-cA_6kbi-a1-m2-cB
49 1r27-a4-m8-cD 465 19 0.1364 0.0194 0.4737 6.6 1r27-a4-m2-cB_1r27-a4-m8-cD
50 1r27-a4-m2-cB 465 19 0.1364 0.0194 0.4737 6.6 1r27-a4-m2-cB_1r27-a4-m8-cD
51 6kbi-a1-m2-cB 588 48 0.2121 0.0238 0.2917 6.7 6kbi-a1-m1-cA_6kbi-a1-m2-cB
52 3egw-a1-m2-cB 509 19 0.1364 0.0177 0.4737 6.9 3egw-a1-m1-cB_3egw-a1-m2-cB
53 3egw-a1-m1-cB 509 19 0.1364 0.0177 0.4737 6.9 3egw-a1-m1-cB_3egw-a1-m2-cB
54 4oaa-a1-m1-cB 391 20 0.1212 0.0205 0.4000 7.9 4oaa-a1-m1-cA_4oaa-a1-m1-cB
55 4oaa-a1-m1-cA 391 20 0.1212 0.0205 0.4000 7.9 4oaa-a1-m1-cA_4oaa-a1-m1-cB
56 2pbz-a1-m1-cC 290 23 0.1667 0.0379 0.4783 8.2 2pbz-a1-m1-cB_2pbz-a1-m1-cC
57 2pbz-a1-m1-cB 290 23 0.1667 0.0379 0.4783 8.2 2pbz-a1-m1-cB_2pbz-a1-m1-cC
58 1xer-a1-m2-cA 102 65 0.2879 0.1863 0.2923 8.9 1xer-a1-m1-cA_1xer-a1-m2-cA
59 1xer-a1-m1-cA 102 65 0.2879 0.1863 0.2923 8.9 1xer-a1-m1-cA_1xer-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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