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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSA
ITIEEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1sj1-a1-m1-cB 66 66 1.0000 1.0000 1.0000 9.12e-43 1sj1-a1-m1-cA_1sj1-a1-m1-cB
2 1sj1-a1-m1-cA 66 66 1.0000 1.0000 1.0000 9.12e-43 1sj1-a1-m1-cA_1sj1-a1-m1-cB
3 4dhv-a1-m1-cA 66 66 0.9848 0.9848 0.9848 3.95e-41 4dhv-a1-m1-cB_4dhv-a1-m1-cA
4 3pni-a3-m2-cA 66 66 0.9848 0.9848 0.9848 3.95e-41 3pni-a3-m1-cB_3pni-a3-m2-cA
5 3pni-a3-m1-cB 66 66 0.9848 0.9848 0.9848 3.95e-41 3pni-a3-m1-cB_3pni-a3-m2-cA
6 4dhv-a1-m1-cB 65 66 0.9697 0.9846 0.9697 1.30e-38 4dhv-a1-m1-cB_4dhv-a1-m1-cA
7 1fxd-a1-m2-cA 57 55 0.3636 0.4211 0.4364 1.73e-07 1fxd-a1-m1-cA_1fxd-a1-m2-cA
8 1fxd-a1-m1-cA 57 55 0.3636 0.4211 0.4364 1.73e-07 1fxd-a1-m1-cA_1fxd-a1-m2-cA
9 1fxr-a1-m1-cB 64 67 0.4242 0.4375 0.4179 0.005 1fxr-a1-m1-cA_1fxr-a1-m1-cB
10 1fxr-a1-m1-cA 64 67 0.4242 0.4375 0.4179 0.005 1fxr-a1-m1-cA_1fxr-a1-m1-cB
11 8c0z-a1-m1-cF 158 63 0.3636 0.1519 0.3810 0.13 8c0z-a1-m1-cC_8c0z-a1-m1-cF
12 8c0z-a1-m1-cC 158 63 0.3636 0.1519 0.3810 0.13 8c0z-a1-m1-cC_8c0z-a1-m1-cF
13 1xer-a1-m2-cA 102 65 0.3030 0.1961 0.3077 0.18 1xer-a1-m1-cA_1xer-a1-m2-cA
14 1xer-a1-m1-cA 102 65 0.3030 0.1961 0.3077 0.18 1xer-a1-m1-cA_1xer-a1-m2-cA
15 5t61-a2-m1-cj 344 71 0.3333 0.0640 0.3099 0.21 5t61-a2-m1-cd_5t61-a2-m1-cj
16 5t61-a2-m1-cj 344 62 0.3030 0.0581 0.3226 0.28 5t61-a2-m1-cd_5t61-a2-m1-cj
17 5t61-a2-m1-cj 344 64 0.2879 0.0552 0.2969 2.6 5t61-a2-m1-cd_5t61-a2-m1-cj
18 5t61-a2-m1-cj 344 74 0.3333 0.0640 0.2973 7.0 5t61-a2-m1-cd_5t61-a2-m1-cj
19 5t61-a2-m1-cd 340 71 0.3333 0.0647 0.3099 0.22 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
20 5t61-a2-m1-cd 340 62 0.3030 0.0588 0.3226 0.29 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
21 5t61-a2-m1-cd 340 64 0.2879 0.0559 0.2969 2.7 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
22 5t61-a2-m1-cd 340 74 0.3333 0.0647 0.2973 7.2 5t61-a2-m1-cd_5t61-a2-m1-cj, 5t61-a2-m1-cd_5t61-a2-m1-cv
23 5t61-a2-m1-cv 346 71 0.3333 0.0636 0.3099 0.22 5t61-a2-m1-cd_5t61-a2-m1-cv
24 5t61-a2-m1-cv 346 62 0.3030 0.0578 0.3226 0.31 5t61-a2-m1-cd_5t61-a2-m1-cv
25 5t61-a2-m1-cv 346 64 0.2879 0.0549 0.2969 2.8 5t61-a2-m1-cd_5t61-a2-m1-cv
26 5t61-a2-m1-cv 346 74 0.3333 0.0636 0.2973 7.7 5t61-a2-m1-cd_5t61-a2-m1-cv
27 6brg-a5-m1-cD 500 28 0.1818 0.0240 0.4286 5.8 6brg-a5-m1-cC_6brg-a5-m1-cD
28 6brg-a5-m1-cC 500 28 0.1818 0.0240 0.4286 5.8 6brg-a5-m1-cC_6brg-a5-m1-cD
29 2pbz-a1-m1-cC 290 23 0.1667 0.0379 0.4783 8.2 2pbz-a1-m1-cB_2pbz-a1-m1-cC
30 2pbz-a1-m1-cB 290 23 0.1667 0.0379 0.4783 8.2 2pbz-a1-m1-cB_2pbz-a1-m1-cC
31 6byg-a1-m1-cA 856 21 0.1515 0.0117 0.4762 8.8 6byg-a1-m1-cA_6byg-a1-m1-cB
32 6byg-a1-m1-cB 858 21 0.1515 0.0117 0.4762 8.8 6byg-a1-m1-cA_6byg-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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