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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
AYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDYKIKLRSSGYRL
VYQVIDEKVVVFVISVGKAERSEVYSEAVKRIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4fxi-a4-m1-cC 93 93 1.0000 1.0000 1.0000 1.29e-61 4fxi-a4-m1-cB_4fxi-a4-m1-cC
2 4fxi-a4-m1-cB 93 93 1.0000 1.0000 1.0000 1.29e-61 4fxi-a4-m1-cB_4fxi-a4-m1-cC
3 4fxh-a3-m1-cB 93 93 1.0000 1.0000 1.0000 1.29e-61 4fxh-a3-m1-cA_4fxh-a3-m1-cB
4 4fxh-a3-m1-cA 87 93 0.9355 1.0000 0.9355 2.45e-54 4fxh-a3-m1-cA_4fxh-a3-m1-cB
5 3wnq-a1-m1-cD 335 66 0.2151 0.0597 0.3030 1.1 3wnq-a1-m1-cA_3wnq-a1-m1-cD, 3wnq-a1-m1-cB_3wnq-a1-m1-cD, 3wnq-a1-m1-cC_3wnq-a1-m1-cD
6 3wnq-a1-m1-cC 335 66 0.2151 0.0597 0.3030 1.1 3wnq-a1-m1-cC_3wnq-a1-m1-cD
7 3wnq-a1-m1-cB 335 66 0.2151 0.0597 0.3030 1.1 3wnq-a1-m1-cB_3wnq-a1-m1-cD
8 3wnq-a1-m1-cA 335 66 0.2151 0.0597 0.3030 1.1 3wnq-a1-m1-cA_3wnq-a1-m1-cD
9 4jz6-a1-m2-cA 484 28 0.1183 0.0227 0.3929 1.3 4jz6-a1-m1-cA_4jz6-a1-m2-cA
10 4jz6-a1-m1-cA 484 28 0.1183 0.0227 0.3929 1.3 4jz6-a1-m1-cA_4jz6-a1-m2-cA
11 6x7n-a1-m2-cA 302 31 0.1290 0.0397 0.3871 1.8 6x7n-a1-m1-cA_6x7n-a1-m2-cA
12 6x7n-a1-m1-cA 302 31 0.1290 0.0397 0.3871 1.8 6x7n-a1-m1-cA_6x7n-a1-m2-cA
13 7lbw-a1-m1-cB 190 33 0.1290 0.0632 0.3636 2.2 7lbw-a1-m1-cB_7lbw-a1-m1-cA
14 7lbw-a1-m1-cA 193 33 0.1290 0.0622 0.3636 2.2 7lbw-a1-m1-cB_7lbw-a1-m1-cA
15 2z8u-a3-m1-cP 173 90 0.2688 0.1445 0.2778 3.1 2z8u-a3-m1-cP_2z8u-a3-m1-cQ
16 2z8u-a1-m1-cA 169 90 0.2796 0.1538 0.2889 3.2 2z8u-a1-m1-cA_2z8u-a1-m1-cQ
17 6juy-a1-m1-cB 637 19 0.0968 0.0141 0.4737 3.4 6juy-a1-m1-cD_6juy-a1-m1-cB
18 2z8u-a3-m1-cQ 175 90 0.2688 0.1429 0.2778 3.4 2z8u-a3-m1-cP_2z8u-a3-m1-cQ
19 2z8u-a1-m1-cQ 175 90 0.2688 0.1429 0.2778 3.4 2z8u-a1-m1-cA_2z8u-a1-m1-cQ
20 6rvb-a2-m2-cD 443 45 0.1613 0.0339 0.3333 5.4 6rvb-a2-m1-cC_6rvb-a2-m2-cD
21 6rvb-a2-m1-cC 443 45 0.1613 0.0339 0.3333 5.4 6rvb-a2-m1-cC_6rvb-a2-m2-cD
22 2avw-a2-m1-cC 289 60 0.1720 0.0554 0.2667 5.7 2avw-a2-m1-cC_2avw-a2-m1-cD
23 2avw-a2-m1-cD 296 60 0.1720 0.0541 0.2667 5.7 2avw-a2-m1-cC_2avw-a2-m1-cD
24 6juy-a1-m1-cD 623 16 0.0860 0.0128 0.5000 8.5 6juy-a1-m1-cD_6juy-a1-m1-cA, 6juy-a1-m1-cD_6juy-a1-m1-cB, 6juy-a1-m1-cD_6juy-a1-m1-cC
25 6juy-a1-m1-cA 639 16 0.0860 0.0125 0.5000 9.0 6juy-a1-m1-cD_6juy-a1-m1-cA
26 6juy-a1-m1-cC 656 16 0.0860 0.0122 0.5000 9.0 6juy-a1-m1-cD_6juy-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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