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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
AYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDYKIKRLVYQVID
EKVVVFVISVGKAERSEVYSEAVKRIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4fxh-a3-m1-cA 87 87 1.0000 1.0000 1.0000 4.17e-57 4fxh-a3-m1-cA_4fxh-a3-m1-cB
2 4fxi-a4-m1-cC 93 93 1.0000 0.9355 0.9355 2.29e-54 4fxi-a4-m1-cB_4fxi-a4-m1-cC
3 4fxi-a4-m1-cB 93 93 1.0000 0.9355 0.9355 2.29e-54 4fxi-a4-m1-cB_4fxi-a4-m1-cC
4 4fxh-a3-m1-cB 93 93 1.0000 0.9355 0.9355 2.29e-54 4fxh-a3-m1-cA_4fxh-a3-m1-cB
5 4jz6-a1-m2-cA 484 28 0.1264 0.0227 0.3929 1.2 4jz6-a1-m1-cA_4jz6-a1-m2-cA
6 4jz6-a1-m1-cA 484 28 0.1264 0.0227 0.3929 1.2 4jz6-a1-m1-cA_4jz6-a1-m2-cA
7 6x7n-a1-m2-cA 302 31 0.1379 0.0397 0.3871 1.3 6x7n-a1-m1-cA_6x7n-a1-m2-cA
8 6x7n-a1-m1-cA 302 31 0.1379 0.0397 0.3871 1.3 6x7n-a1-m1-cA_6x7n-a1-m2-cA
9 6juy-a1-m1-cB 637 19 0.1034 0.0141 0.4737 2.9 6juy-a1-m1-cD_6juy-a1-m1-cB
10 1rpx-a1-m2-cC 230 42 0.1264 0.0478 0.2619 5.3 1rpx-a1-m1-cC_1rpx-a1-m2-cC, 1rpx-a1-m2-cB_1rpx-a1-m2-cC
11 1rpx-a1-m2-cB 230 42 0.1264 0.0478 0.2619 5.3 1rpx-a1-m2-cB_1rpx-a1-m2-cC
12 1rpx-a1-m1-cC 230 42 0.1264 0.0478 0.2619 5.3 1rpx-a1-m1-cC_1rpx-a1-m2-cC
13 6rvb-a2-m2-cD 443 45 0.1724 0.0339 0.3333 5.9 6rvb-a2-m1-cC_6rvb-a2-m2-cD
14 6rvb-a2-m1-cC 443 45 0.1724 0.0339 0.3333 5.9 6rvb-a2-m1-cC_6rvb-a2-m2-cD
15 7kl8-a1-m1-cB 140 80 0.2299 0.1429 0.2500 7.5 7kl8-a1-m1-cA_7kl8-a1-m1-cB
16 7kl8-a1-m1-cA 140 80 0.2299 0.1429 0.2500 7.5 7kl8-a1-m1-cA_7kl8-a1-m1-cB
17 6juy-a1-m1-cD 623 16 0.0920 0.0128 0.5000 7.9 6juy-a1-m1-cD_6juy-a1-m1-cA, 6juy-a1-m1-cD_6juy-a1-m1-cB, 6juy-a1-m1-cD_6juy-a1-m1-cC
18 6juy-a1-m1-cC 656 16 0.0920 0.0122 0.5000 8.0 6juy-a1-m1-cD_6juy-a1-m1-cC
19 6juy-a1-m1-cA 639 16 0.0920 0.0125 0.5000 8.2 6juy-a1-m1-cD_6juy-a1-m1-cA
20 2z8u-a3-m1-cP 173 90 0.2759 0.1387 0.2667 8.4 2z8u-a3-m1-cP_2z8u-a3-m1-cQ
21 2z8u-a1-m1-cA 169 90 0.2759 0.1420 0.2667 8.5 2z8u-a1-m1-cA_2z8u-a1-m1-cQ
22 2z8u-a3-m1-cQ 175 90 0.2759 0.1371 0.2667 8.7 2z8u-a3-m1-cP_2z8u-a3-m1-cQ
23 2z8u-a1-m1-cQ 175 90 0.2759 0.1371 0.2667 8.7 2z8u-a1-m1-cA_2z8u-a1-m1-cQ

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Reference:
Jacob Schwartz et al.

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