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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
CAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIV
IIASFVTMPDEEARTWRPNVAYFEGDNEMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1aw8-a1-m2-cE 90 90 1.0000 1.0000 1.0000 8.60e-63 1aw8-a1-m2-cB_1aw8-a1-m2-cE
2 1aw8-a1-m2-cB 90 90 1.0000 1.0000 1.0000 8.60e-63 1aw8-a1-m2-cB_1aw8-a1-m2-cE
3 1vc3-a2-m4-cB 95 89 0.4667 0.4421 0.4719 1.98e-27 1vc3-a2-m3-cB_1vc3-a2-m4-cB
4 1vc3-a2-m3-cB 95 89 0.4667 0.4421 0.4719 1.98e-27 1vc3-a2-m3-cB_1vc3-a2-m4-cB
5 6p02-a1-m1-cH 90 88 0.4444 0.4444 0.4545 3.85e-25 6p02-a1-m1-cB_6p02-a1-m1-cH
6 6p02-a1-m1-cB 90 88 0.4444 0.4444 0.4545 3.85e-25 6p02-a1-m1-cB_6p02-a1-m1-cH
7 3plx-a1-m4-cB 100 86 0.4333 0.3900 0.4535 1.72e-21 3plx-a1-m2-cB_3plx-a1-m4-cB
8 3plx-a1-m2-cB 100 86 0.4333 0.3900 0.4535 1.72e-21 3plx-a1-m2-cB_3plx-a1-m4-cB
9 1uhe-a2-m8-cA 97 88 0.3778 0.3505 0.3864 1.94e-15 1uhe-a2-m6-cA_1uhe-a2-m8-cA
10 1uhe-a2-m6-cA 97 88 0.3778 0.3505 0.3864 1.94e-15 1uhe-a2-m6-cA_1uhe-a2-m8-cA
11 3oug-a3-m1-cI 105 74 0.2889 0.2476 0.3514 8.04e-11 3oug-a3-m1-cG_3oug-a3-m1-cI
12 3oug-a3-m1-cH 105 74 0.2889 0.2476 0.3514 8.04e-11 3oug-a3-m1-cB_3oug-a3-m1-cH
13 3oug-a3-m1-cG 105 74 0.2889 0.2476 0.3514 8.04e-11 3oug-a3-m1-cG_3oug-a3-m1-cI
14 3oug-a3-m1-cB 105 74 0.2889 0.2476 0.3514 8.04e-11 3oug-a3-m1-cB_3oug-a3-m1-cH
15 4xdz-a1-m1-cB 329 31 0.1667 0.0456 0.4839 0.80 4xdz-a1-m1-cA_4xdz-a1-m1-cB
16 4xdz-a1-m1-cA 328 31 0.1667 0.0457 0.4839 0.81 4xdz-a1-m1-cA_4xdz-a1-m1-cB
17 2x4h-a1-m1-cD 129 40 0.1444 0.1008 0.3250 1.7 2x4h-a1-m1-cD_2x4h-a1-m1-cB, 2x4h-a1-m1-cD_2x4h-a1-m1-cC
18 2x4h-a1-m1-cB 130 40 0.1444 0.1000 0.3250 1.8 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cB
19 2x4h-a1-m1-cC 131 40 0.1444 0.0992 0.3250 1.9 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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